Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 AC015813.6-201ENST00000624409 5808 ntBASIC4.62□□□□□ -1.67
BRF2Q9HAW0 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
BRF2Q9HAW0 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.62□□□□□ -1.67
BRF2Q9HAW0 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 PCDH15-214ENST00000395446 3948 ntTSL 5 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 RN7SKP95-201ENST00000362860 303 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 RNU4-4P-201ENST00000364588 130 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AL139098.1-201ENST00000407291 389 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 BLOC1S2P1-201ENST00000428431 301 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC010881.1-201ENST00000433830 235 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC092393.1-201ENST00000439625 742 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 RAB11AP1-201ENST00000442978 646 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 HMGB1P16-201ENST00000447155 540 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC104651.2-201ENST00000447549 528 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 RPL7P59-201ENST00000447700 943 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 RPS20P21-201ENST00000466859 343 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 RPL23AP44-201ENST00000482216 473 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 MTND4LP2-201ENST00000502312 285 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 DYNLL1P6-201ENST00000503440 264 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 GAPDHP56-201ENST00000506031 988 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC118282.1-201ENST00000506408 765 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC109471.1-201ENST00000511631 612 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 IGLV2-28-201ENST00000520681 304 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 OR5AN2P-201ENST00000534535 896 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC124068.1-201ENST00000563131 678 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AP005119.2-201ENST00000579735 1105 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC006116.5-201ENST00000591936 559 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC020910.3-201ENST00000603701 874 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC133552.5-201ENST00000604266 540 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AL354760.1-201ENST00000608357 643 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 MIR6862-1-201ENST00000613016 70 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 MIR6862-2-201ENST00000614755 70 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC006386.1-201ENST00000619436 415 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC091905.4-201ENST00000623432 202 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AL512506.2-201ENST00000624472 458 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 LINC02211-204ENST00000642024 1070 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 SAGE4P-201ENST00000442271 3381 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 Z73965.1-201ENST00000623412 2297 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 AL445487.1-201ENST00000415694 1580 ntBASIC4.61□□□□□ -1.67
BRF2Q9HAW0 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.61□□□□□ -1.67
BRF2Q9HAW0 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 EIF2AP4-201ENST00000424793 1781 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 UBBP2-201ENST00000376781 231 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 AC092642.1-201ENST00000392417 425 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 RN7SKP213-201ENST00000410746 298 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 MOB1AP1-201ENST00000430903 535 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 AP000893.1-201ENST00000474462 794 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 BOLA3P3-201ENST00000505182 232 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 SNX5P1-201ENST00000505757 1041 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 AC090071.1-201ENST00000507713 644 ntBASIC4.6□□□□□ -1.67
BRF2Q9HAW0 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC4.6□□□□□ -1.67
BRF2Q9HAW0 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms