Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 TRBV21OR9-2-201ENST00000331828 367 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 IL6STP1-201ENST00000346911 1020 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AP000580.1-201ENST00000404439 358 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 RPL31P52-201ENST00000407532 367 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AC114755.2-201ENST00000413520 361 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AC004690.1-201ENST00000418216 328 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 RPL17P36-201ENST00000420302 549 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AL009174.1-201ENST00000426577 416 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 RPL12P46-201ENST00000436610 195 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 RPS26P30-201ENST00000443431 335 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AC010733.1-201ENST00000451515 401 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AC104689.1-201ENST00000473356 768 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AC021146.3-201ENST00000511911 260 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 RN7SKP122-201ENST00000515923 296 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 SNORA19.3-201ENST00000516165 130 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AL110118.1-201ENST00000553543 400 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 NDUFB4P11-201ENST00000560510 395 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 RPAP2P1-201ENST00000603626 1168 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AC020910.2-201ENST00000603635 610 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 IGKV1OR2-9-201ENST00000603957 287 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 IGKV1OR2-11-201ENST00000604120 287 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 IMMP1LP1-201ENST00000605170 488 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AL050303.3-201ENST00000613704 284 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 Z95327.2-201ENST00000414579 1873 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AC010928.1-201ENST00000592477 1447 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AL672167.1-203ENST00000641299 2975 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 FOXP2-220ENST00000634411 4065 ntTSL 5 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 AC104118.1-201ENST00000607625 1589 ntBASIC4.7□□□□□ -1.66
POLR1BQ9H9Y6 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 SNORA70F-201ENST00000384142 135 ntBASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 SNORA70.10-201ENST00000384515 134 ntBASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 MCTS2P-201ENST00000394552 546 ntBASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 MTCO2P31-201ENST00000402702 684 ntBASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 AL592291.1-201ENST00000403830 352 ntBASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 CKS1BP6-201ENST00000424932 240 ntBASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 OSTCP5-201ENST00000425293 453 ntBASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 HMGB1P45-201ENST00000435986 653 ntBASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 AC073143.1-201ENST00000436316 395 ntBASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 LINC02013-201ENST00000438156 526 ntTSL 2 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 AC016831.4-201ENST00000438302 307 ntBASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 ARL2BPP10-201ENST00000446487 531 ntBASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 RHEBP2-201ENST00000450289 600 ntBASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 RPL23AP56-201ENST00000460778 453 ntBASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 OR52A4P-201ENST00000472867 958 ntBASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 RPL21P131-201ENST00000497298 483 ntBASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC4.69□□□□□ -1.66
POLR1BQ9H9Y6 AC008885.2-201ENST00000509506 930 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms