Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC4.36□□□□□ -1.71
DDX47Q9H0S4 AC084783.1-201ENST00000565846 910 ntBASIC4.36□□□□□ -1.71
DDX47Q9H0S4 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.36□□□□□ -1.71
DDX47Q9H0S4 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.36□□□□□ -1.71
DDX47Q9H0S4 AP005019.3-201ENST00000620418 560 ntBASIC4.36□□□□□ -1.71
DDX47Q9H0S4 AC000123.2-201ENST00000623124 461 ntBASIC4.36□□□□□ -1.71
DDX47Q9H0S4 AC091953.3-201ENST00000623220 236 ntBASIC4.36□□□□□ -1.71
DDX47Q9H0S4 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.36□□□□□ -1.71
DDX47Q9H0S4 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
DDX47Q9H0S4 AC074029.4-201ENST00000624796 1859 ntBASIC4.36□□□□□ -1.71
DDX47Q9H0S4 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
DDX47Q9H0S4 AL592437.2-201ENST00000421655 2434 ntBASIC4.36□□□□□ -1.71
DDX47Q9H0S4 AC017007.4-201ENST00000503353 1352 ntBASIC4.36□□□□□ -1.71
DDX47Q9H0S4 AC107953.2-201ENST00000518362 1408 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DDX47Q9H0S4 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
DDX47Q9H0S4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.36□□□□□ -1.71
DDX47Q9H0S4 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.36□□□□□ -1.71
DDX47Q9H0S4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 CCSER1-201ENST00000432775 3927 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 SYF2-202ENST00000354361 926 ntTSL 2 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 SNORA11F-201ENST00000408237 128 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AL157831.1-201ENST00000426134 473 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 USP9YP9-201ENST00000429406 715 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AC023141.6-201ENST00000429418 337 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 MTCO1P54-201ENST00000430139 712 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AC011742.1-201ENST00000431448 434 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 RPL23AP81-201ENST00000455252 467 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 NFU1-207ENST00000462320 558 ntTSL 4 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 RPL23AP73-201ENST00000492507 471 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 RPL31P61-201ENST00000496160 376 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AC105233.1-201ENST00000498840 781 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AC010468.3-201ENST00000508225 458 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 SNORA76.2-201ENST00000517095 137 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 TRAPPC2P2-201ENST00000517589 409 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AL360157.1-201ENST00000565962 87 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 HNRNPCP4-201ENST00000571636 900 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 PCNAP1-202ENST00000595299 752 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 ABI1P1-201ENST00000603375 1120 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AL671309.1-201ENST00000603750 544 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AC010857.1-201ENST00000606398 594 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AC006946.3-201ENST00000609791 756 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AC012409.3-201ENST00000611343 981 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 uc_338.13-201ENST00000618243 179 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AP006248.2-201ENST00000623309 592 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AL359715.5-201ENST00000623431 443 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 MFSD8-242ENST00000641690 4199 ntBASIC4.35□□□□□ -1.71
DDX47Q9H0S4 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
DDX47Q9H0S4 AC006971.1-201ENST00000407916 4486 ntBASIC4.34□□□□□ -1.71
DDX47Q9H0S4 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
DDX47Q9H0S4 AC103591.2-201ENST00000265259 766 ntBASIC4.34□□□□□ -1.71
DDX47Q9H0S4 FAM3C2-201ENST00000312214 681 ntBASIC4.34□□□□□ -1.71
DDX47Q9H0S4 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC4.34□□□□□ -1.71
DDX47Q9H0S4 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
DDX47Q9H0S4 RNU6-984P-201ENST00000363236 109 ntBASIC4.34□□□□□ -1.71
DDX47Q9H0S4 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
DDX47Q9H0S4 RNU6-1005P-201ENST00000384519 107 ntBASIC4.34□□□□□ -1.71
DDX47Q9H0S4 RNU2-6P-201ENST00000411404 190 ntBASIC4.34□□□□□ -1.71
DDX47Q9H0S4 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.34□□□□□ -1.71
DDX47Q9H0S4 PNRC2P1-201ENST00000423940 420 ntBASIC4.34□□□□□ -1.71
DDX47Q9H0S4 RPL30P3-201ENST00000424262 333 ntBASIC4.34□□□□□ -1.71
DDX47Q9H0S4 RPEP3-201ENST00000425462 676 ntBASIC4.34□□□□□ -1.71
DDX47Q9H0S4 AL360081.1-201ENST00000428299 555 ntBASIC4.34□□□□□ -1.71
DDX47Q9H0S4 ELOCP11-201ENST00000436690 332 ntBASIC4.34□□□□□ -1.71
DDX47Q9H0S4 ELOCP16-201ENST00000444494 332 ntBASIC4.34□□□□□ -1.71
DDX47Q9H0S4 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC4.34□□□□□ -1.71
DDX47Q9H0S4 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.34□□□□□ -1.71
DDX47Q9H0S4 RPL7P31-201ENST00000450192 724 ntBASIC4.34□□□□□ -1.71
DDX47Q9H0S4 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.34□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms