Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 MT-RNR1-201ENST00000389680 954 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 HMGB3P5-201ENST00000428894 612 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 RPL37P1-201ENST00000432310 284 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 CEACAMP1-201ENST00000434624 1035 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 RPL12P46-201ENST00000436610 195 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 FTH1P25-201ENST00000447665 469 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 AC012671.1-201ENST00000451912 203 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 DDX39BP2-208ENST00000453923 258 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 AC091564.1-201ENST00000464563 479 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 METTL15P1-201ENST00000481421 1045 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 AC041039.1-201ENST00000485656 536 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 AL132838.2-201ENST00000492041 314 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 F11-205ENST00000492972 1204 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 FTH1P9-201ENST00000513251 355 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM4Q9C037 AL355096.1-201ENST00000553561 447 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 RN7SL339P-201ENST00000580597 296 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM4Q9C037 U7.8-201ENST00000619968 63 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 AC007546.2-201ENST00000623996 360 ntBASIC4.19□□□□□ -1.74
TRIM4Q9C037 RUVBL2-213ENST00000639391 120 ntTSL 5 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
TRIM4Q9C037 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC4.19□□□□□ -1.74
TRIM4Q9C037 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM4Q9C037 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM4Q9C037 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM4Q9C037 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM4Q9C037 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM4Q9C037 RNA5SP366-201ENST00000365454 123 ntBASIC4.18□□□□□ -1.74
TRIM4Q9C037 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 RNU6ATAC-201ENST00000408749 126 ntBASIC4.18□□□□□ -1.74
TRIM4Q9C037 RN7SKP159-201ENST00000410657 292 ntBASIC4.18□□□□□ -1.74
TRIM4Q9C037 OR8G2P-201ENST00000412796 908 ntBASIC4.18□□□□□ -1.74
TRIM4Q9C037 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 NPM1P48-201ENST00000436002 853 ntBASIC4.18□□□□□ -1.74
TRIM4Q9C037 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 UBE2V1P3-201ENST00000439651 417 ntBASIC4.18□□□□□ -1.74
TRIM4Q9C037 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 SNRPGP5-201ENST00000456003 220 ntBASIC4.18□□□□□ -1.74
TRIM4Q9C037 SNORA59A-201ENST00000459326 152 ntBASIC4.18□□□□□ -1.74
TRIM4Q9C037 RN7SL98P-201ENST00000462271 300 ntBASIC4.18□□□□□ -1.74
TRIM4Q9C037 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 AC079171.1-201ENST00000568788 914 ntBASIC4.18□□□□□ -1.74
TRIM4Q9C037 MIR4286-201ENST00000580651 93 ntBASIC4.18□□□□□ -1.74
TRIM4Q9C037 AC005034.4-201ENST00000603612 899 ntBASIC4.18□□□□□ -1.74
TRIM4Q9C037 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM4Q9C037 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM4Q9C037 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM4Q9C037 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM4Q9C037 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
TRIM4Q9C037 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 AC233968.1-201ENST00000611212 1300 ntBASIC4.18□□□□□ -1.74
TRIM4Q9C037 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
TRIM4Q9C037 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
TRIM4Q9C037 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM4Q9C037 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.17□□□□□ -1.74
TRIM4Q9C037 OTUD4P1-201ENST00000237841 3067 ntBASIC4.17□□□□□ -1.74
TRIM4Q9C037 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
TRIM4Q9C037 RNU1-130P-201ENST00000363930 160 ntBASIC4.17□□□□□ -1.74
TRIM4Q9C037 RN7SKP177-201ENST00000410567 355 ntBASIC4.17□□□□□ -1.74
TRIM4Q9C037 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM4Q9C037 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.17□□□□□ -1.74
TRIM4Q9C037 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM4Q9C037 NPM1P26-201ENST00000426339 738 ntBASIC4.17□□□□□ -1.74
TRIM4Q9C037 AC009263.1-201ENST00000441193 1239 ntBASIC4.17□□□□□ -1.74
TRIM4Q9C037 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC4.17□□□□□ -1.74
TRIM4Q9C037 AL162151.2-201ENST00000448875 158 ntBASIC4.17□□□□□ -1.74
TRIM4Q9C037 RN7SL585P-201ENST00000470538 280 ntBASIC4.17□□□□□ -1.74
TRIM4Q9C037 RPL7P47-201ENST00000497299 556 ntBASIC4.17□□□□□ -1.74
TRIM4Q9C037 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
TRIM4Q9C037 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms