Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 AC069234.4-201ENST00000621276 412 ntBASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 AL357559.1-201ENST00000622228 274 ntBASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 AC011155.2-201ENST00000623202 216 ntBASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 AC091925.1-201ENST00000623204 462 ntBASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 AC012629.3-201ENST00000623397 328 ntBASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 AC244517.12-201ENST00000623581 663 ntBASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 AC022418.1-201ENST00000624118 445 ntBASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 AP000843.1-201ENST00000624880 701 ntBASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 LINC00466-206ENST00000634576 1279 ntTSL 5 BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 FAAHP1-207ENST00000635606 398 ntTSL 3 BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 AC008013.2-202ENST00000637965 364 ntBASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 ATP5A1P10-201ENST00000622403 1603 ntBASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 EXOC5P1-201ENST00000510543 1969 ntBASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 LARS-201ENST00000274562 2213 ntTSL 2 BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 ZNF502-201ENST00000296091 3270 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 AL513523.1-201ENST00000417868 1309 ntBASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 INTS4-209ENST00000534064 3156 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 PLRG1-201ENST00000302078 1673 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 AC112243.1-201ENST00000623949 3851 ntBASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 AGXT2-201ENST00000231420 2364 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
LCE3DQ9BYE3 CS-212ENST00000548567 3057 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC007823.1-201ENST00000569932 1566 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC091305.2-201ENST00000624049 1576 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 DTNA-205ENST00000399113 2232 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AP002370.1-201ENST00000528055 1602 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AC105114.1-201ENST00000624795 1862 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AL078621.1-201ENST00000272567 768 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 RNU6-1115P-201ENST00000362490 106 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 Y_RNA.80-201ENST00000362996 102 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 SNORD82-201ENST00000365530 70 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 RNU5E-6P-201ENST00000365574 115 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 C6orf48-201ENST00000375633 586 ntAPPRIS P1 TSL 2 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CSNK2B-202ENST00000375866 936 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 PPIAP26-201ENST00000377951 522 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 SNORA70H-201ENST00000383910 135 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 RNU1-74P-201ENST00000384108 171 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 SNORA70J-201ENST00000384182 135 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 RNU6-331P-201ENST00000384724 107 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 U3.29-201ENST00000391296 212 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 RPL7-203ENST00000396466 762 ntTSL 3 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AL049697.2-201ENST00000403708 294 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 AL133260.1-201ENST00000405720 405 ntBASIC1.89□□□□□ -2.11
LCE3DQ9BYE3 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms