Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 SKP1P3-201ENST00000429280 487 ntBASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 AC093755.1-201ENST00000512950 1023 ntBASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 RNA5SP341-201ENST00000516261 117 ntBASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 AC008802.1-201ENST00000519121 791 ntBASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 LINC00561-201ENST00000565815 2738 ntBASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.09□□□□□ -1.91
CSMD1Q96PZ7 TPT1P1-201ENST00000458495 518 ntBASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 NECTIN3-AS1-202ENST00000467426 664 ntTSL 3 BASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 RPL31P61-201ENST00000496160 376 ntBASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 AC025554.1-201ENST00000505641 188 ntBASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 AC008694.2-201ENST00000517591 306 ntBASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 AL163642.2-201ENST00000604722 1019 ntBASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.92
CSMD1Q96PZ7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 SNORA5B-201ENST00000363786 132 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 RNA5SP235-201ENST00000365411 114 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 AC005002.1-201ENST00000447458 540 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 SMG1P4-204ENST00000523028 4131 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 AC073335.1-201ENST00000427776 363 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 RPL7P48-201ENST00000461513 746 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 AC103783.1-201ENST00000520506 373 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 NRBF2P5-201ENST00000603087 788 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 OR2AS2P-201ENST00000606902 342 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 AP002001.2-201ENST00000529025 1469 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 DNM1P47-203ENST00000571780 12667 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 ASNSP3-201ENST00000451989 1306 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 ATP5HP2-201ENST00000433885 485 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 AP002884.2-201ENST00000471647 395 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 AC084198.1-201ENST00000477747 402 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 RN7SKP46-201ENST00000515942 234 ntBASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
CSMD1Q96PZ7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 REREP1Y-201ENST00000422655 198 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 REREP2Y-201ENST00000439103 200 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 AC093663.1-201ENST00000497190 394 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 DPPA3P2-201ENST00000553589 478 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 AC104662.1-201ENST00000604448 511 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 AL139089.1-201ENST00000620372 975 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 PGBD4P8-201ENST00000412993 562 ntBASIC3.07□□□□□ -1.92
CSMD1Q96PZ7 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 103.5 ms