Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 NPM1P11-201ENST00000417106 855 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.42□□□□□ -1.86
USP9XQ93008 AC097713.2-201ENST00000430199 356 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 NMNAT1P2-201ENST00000435192 860 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 CCDC75P1-201ENST00000469247 791 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 AC019227.1-201ENST00000526902 510 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 SNX6P1-201ENST00000601728 1224 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
USP9XQ93008 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.42□□□□□ -1.86
USP9XQ93008 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.42□□□□□ -1.86
USP9XQ93008 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.42□□□□□ -1.86
USP9XQ93008 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC3.42□□□□□ -1.86
USP9XQ93008 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.42□□□□□ -1.86
USP9XQ93008 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
USP9XQ93008 RNA5SP51-201ENST00000364750 119 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 RPS29P4-201ENST00000414733 161 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 AC005326.1-201ENST00000429197 123 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.42□□□□□ -1.86
USP9XQ93008 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC3.42□□□□□ -1.86
USP9XQ93008 MTND6P32-201ENST00000457611 483 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC3.42□□□□□ -1.86
USP9XQ93008 AGGF1P3-201ENST00000493675 1213 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 BNIP3P41-201ENST00000503774 571 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 SUMO2P19-201ENST00000518920 295 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 RANP9-201ENST00000519957 271 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC3.42□□□□□ -1.86
USP9XQ93008 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC3.42□□□□□ -1.86
USP9XQ93008 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC3.42□□□□□ -1.86
USP9XQ93008 AC091905.2-201ENST00000623143 306 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC3.42□□□□□ -1.86
USP9XQ93008 NANOGNB-202ENST00000640040 824 ntAPPRIS ALT2 TSL 5 BASIC3.42□□□□□ -1.86
USP9XQ93008 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.42□□□□□ -1.86
USP9XQ93008 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
USP9XQ93008 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC3.42□□□□□ -1.86
USP9XQ93008 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
USP9XQ93008 MAPK10-320ENST00000641462 6696 ntBASIC3.42□□□□□ -1.86
USP9XQ93008 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP9XQ93008 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP9XQ93008 RNA5SP399-201ENST00000364003 117 ntBASIC3.41□□□□□ -1.86
USP9XQ93008 RNA5SP120-201ENST00000410900 112 ntBASIC3.41□□□□□ -1.86
USP9XQ93008 AC010285.3-201ENST00000511668 676 ntBASIC3.41□□□□□ -1.86
USP9XQ93008 AC023141.12-201ENST00000512399 199 ntBASIC3.41□□□□□ -1.86
USP9XQ93008 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC3.41□□□□□ -1.86
USP9XQ93008 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.41□□□□□ -1.86
USP9XQ93008 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC3.41□□□□□ -1.86
USP9XQ93008 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.41□□□□□ -1.86
USP9XQ93008 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.41□□□□□ -1.86
USP9XQ93008 AL355365.1-201ENST00000616480 294 ntBASIC3.41□□□□□ -1.86
USP9XQ93008 FRG1EP-201ENST00000634469 770 ntBASIC3.41□□□□□ -1.86
USP9XQ93008 AC027287.1-201ENST00000553115 1453 ntBASIC3.41□□□□□ -1.86
USP9XQ93008 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
USP9XQ93008 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
USP9XQ93008 AL353743.1-202ENST00000431724 1695 ntBASIC3.41□□□□□ -1.86
USP9XQ93008 AL390036.1-202ENST00000634635 2439 ntTSL 5 BASIC3.41□□□□□ -1.86
USP9XQ93008 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.41□□□□□ -1.86
USP9XQ93008 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC3.41□□□□□ -1.86
USP9XQ93008 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.41□□□□□ -1.86
USP9XQ93008 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC3.41□□□□□ -1.86
USP9XQ93008 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP9XQ93008 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP9XQ93008 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
USP9XQ93008 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.41□□□□□ -1.86
USP9XQ93008 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
USP9XQ93008 RBMY2UP-201ENST00000453474 324 ntBASIC3.41□□□□□ -1.86
USP9XQ93008 AC010342.1-201ENST00000514047 877 ntBASIC3.41□□□□□ -1.86
USP9XQ93008 RERGL-202ENST00000536890 367 ntTSL 3 BASIC3.41□□□□□ -1.86
USP9XQ93008 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.41□□□□□ -1.86
USP9XQ93008 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.41□□□□□ -1.86
USP9XQ93008 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.41□□□□□ -1.86
USP9XQ93008 MIR3922-201ENST00000585192 84 ntBASIC3.41□□□□□ -1.86
USP9XQ93008 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.41□□□□□ -1.86
USP9XQ93008 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.4□□□□□ -1.86
USP9XQ93008 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC3.4□□□□□ -1.86
USP9XQ93008 ZCCHC10-201ENST00000324170 2178 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.86
USP9XQ93008 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC3.4□□□□□ -1.86
USP9XQ93008 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC3.4□□□□□ -1.86
USP9XQ93008 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.86
USP9XQ93008 NAMPTP1-201ENST00000440465 2514 ntBASIC3.4□□□□□ -1.86
USP9XQ93008 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC3.4□□□□□ -1.86
USP9XQ93008 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC3.4□□□□□ -1.86
USP9XQ93008 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.4□□□□□ -1.86
USP9XQ93008 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
USP9XQ93008 RNA5SP97-201ENST00000365006 84 ntBASIC3.4□□□□□ -1.86
USP9XQ93008 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.4□□□□□ -1.86
USP9XQ93008 SNORD105B-201ENST00000458770 79 ntBASIC3.4□□□□□ -1.86
USP9XQ93008 AC055855.1-201ENST00000489563 579 ntBASIC3.4□□□□□ -1.86
USP9XQ93008 RNA5SP249-201ENST00000516127 99 ntBASIC3.4□□□□□ -1.86
USP9XQ93008 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC3.4□□□□□ -1.86
USP9XQ93008 DEFB122-202ENST00000569013 197 ntBASIC3.4□□□□□ -1.86
USP9XQ93008 AL360085.1-201ENST00000604713 532 ntBASIC3.4□□□□□ -1.86
USP9XQ93008 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC3.4□□□□□ -1.86
USP9XQ93008 AL592295.2-201ENST00000612578 206 ntBASIC3.4□□□□□ -1.86
USP9XQ93008 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.86
USP9XQ93008 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
USP9XQ93008 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
USP9XQ93008 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC3.4□□□□□ -1.87
USP9XQ93008 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
USP9XQ93008 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.4□□□□□ -1.87
USP9XQ93008 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC3.4□□□□□ -1.87
USP9XQ93008 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC3.4□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms