Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AL445567.2-201ENST00000618935 498 ntBASIC3.33□□□□□ -1.88
ZNF439Q8NDP4 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.33□□□□□ -1.88
ZNF439Q8NDP4 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.33□□□□□ -1.88
ZNF439Q8NDP4 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC3.33□□□□□ -1.88
ZNF439Q8NDP4 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.33□□□□□ -1.88
ZNF439Q8NDP4 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC3.33□□□□□ -1.88
ZNF439Q8NDP4 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
ZNF439Q8NDP4 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
ZNF439Q8NDP4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.33□□□□□ -1.88
ZNF439Q8NDP4 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 OR6C69P-201ENST00000394268 893 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 RPS27AP11-201ENST00000402798 447 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AL034374.1-201ENST00000406329 351 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AMZ2P2-201ENST00000406819 1057 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 RPA2P2-201ENST00000419698 796 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 CHIAP3-201ENST00000423668 1133 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 RPL23AP38-201ENST00000423801 469 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 COX6CP15-201ENST00000426313 211 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 HMGB3P5-201ENST00000428894 612 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AC073143.1-201ENST00000436316 395 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 RPL38P1-201ENST00000460914 211 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AP000873.1-201ENST00000463987 400 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AC105137.1-201ENST00000484355 562 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 RN7SL271P-201ENST00000487601 295 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AC141257.3-201ENST00000572906 215 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AL451044.1-201ENST00000604867 238 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AC010680.4-201ENST00000605334 543 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AC015722.2-201ENST00000622210 551 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 AC010435.1-201ENST00000623353 1177 ntBASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
ZNF439Q8NDP4 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 AC005261.4-201ENST00000600047 1385 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 FAM3C2-201ENST00000312214 681 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 SNORD35B-201ENST00000363660 87 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 RNU1-87P-201ENST00000363727 170 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 SNORA56-201ENST00000383966 129 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 MIR124-3-201ENST00000384866 87 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 RNU11-4P-201ENST00000391149 133 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 TPT1P2-201ENST00000413105 503 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 AL159169.1-201ENST00000421119 127 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 RPL30P3-201ENST00000424262 333 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 BMS1P19-201ENST00000433925 393 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 RPS4XP4-201ENST00000443195 763 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 TPT1P13-201ENST00000449760 499 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 Vault.1-201ENST00000516474 102 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 RAB9BP1-201ENST00000519581 626 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 OR4C2P-201ENST00000530855 1064 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 CYCSP29-201ENST00000533731 318 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 AC025627.2-201ENST00000576220 160 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 AC004943.3-201ENST00000624116 600 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 AC010608.2-201ENST00000624830 470 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 OR52H1-202ENST00000641796 1061 ntBASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
ZNF439Q8NDP4 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms