Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AC116553.2-201ENST00000564203 463 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AC006362.1-201ENST00000567392 174 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AC074051.3-201ENST00000570238 358 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 MTCO1P40-201ENST00000574371 625 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AC020910.3-201ENST00000603701 874 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AC011626.1-201ENST00000604710 562 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AL513477.2-201ENST00000607858 568 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AL160394.1-201ENST00000624765 724 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 NCLP2-201ENST00000416078 1462 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 ZNF833P-201ENST00000424938 1494 ntBASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SLC44A3Q8N4M1 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 MIR589-201ENST00000385238 99 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 SNORA26.8-201ENST00000391306 124 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AC004690.1-201ENST00000418216 328 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 RSL24D1P6-201ENST00000426934 401 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 MTND3P1-201ENST00000441336 220 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 RPL10P17-201ENST00000453852 316 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AL356981.1-201ENST00000454879 684 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 RPS6P4-201ENST00000494693 758 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AK3P4-201ENST00000504283 583 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AC008885.2-201ENST00000509506 930 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 LTV1P1-201ENST00000510683 1237 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 HMGN1P9-201ENST00000515212 298 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 PRELID3BP4-201ENST00000515476 571 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AP002963.1-201ENST00000530590 184 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 UBE2NP1-201ENST00000545592 458 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 MIR3611-201ENST00000584484 83 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AC107982.3-201ENST00000584957 985 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AC125494.3-201ENST00000602759 455 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AC093765.1-201ENST00000603758 881 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AL590392.1-201ENST00000604960 446 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 ZNF663P-202ENST00000641770 1131 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 AC093909.5-201ENST00000621839 1799 ntBASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
SLC44A3Q8N4M1 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.17□□□□□ -1.58
SLC44A3Q8N4M1 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms