Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.94□□□□□ -1.62
SCN4BQ8IWT1 AL583856.2-201ENST00000606298 543 ntBASIC4.94□□□□□ -1.62
SCN4BQ8IWT1 AC013470.4-201ENST00000619978 986 ntBASIC4.94□□□□□ -1.62
SCN4BQ8IWT1 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.94□□□□□ -1.62
SCN4BQ8IWT1 U3.53-201ENST00000628922 216 ntBASIC4.94□□□□□ -1.62
SCN4BQ8IWT1 OR2L1P-202ENST00000641567 1023 ntBASIC4.94□□□□□ -1.62
SCN4BQ8IWT1 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
SCN4BQ8IWT1 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN4BQ8IWT1 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN4BQ8IWT1 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN4BQ8IWT1 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN4BQ8IWT1 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
SCN4BQ8IWT1 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 RN7SKP224-201ENST00000364140 325 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 Z98745.1-201ENST00000402553 494 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 RNU6-77P-201ENST00000410554 91 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AL445487.1-201ENST00000415694 1580 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 RPS24P7-201ENST00000416921 246 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 VPS26BP1-201ENST00000417155 755 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 Z75741.2-201ENST00000417272 1167 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AC027644.1-201ENST00000419595 298 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 OR6C64P-201ENST00000419708 825 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 OR5AW1P-201ENST00000426334 1006 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 RAC1P8-201ENST00000427086 527 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 TPTE2P6-202ENST00000445572 1007 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AC004022.1-201ENST00000447766 1066 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 MTND2P28-201ENST00000457540 1044 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AC005410.1-202ENST00000460347 485 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 MTND6P6-201ENST00000478031 263 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 RPL23AP44-201ENST00000482216 473 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AC092593.2-201ENST00000513866 913 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AC010306.1-201ENST00000523223 1117 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AC110743.1-201ENST00000584870 478 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 NIFKP6-201ENST00000598115 845 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AL020997.3-201ENST00000602843 359 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AL133338.2-201ENST00000604292 736 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AL445423.1-201ENST00000609941 536 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AP000484.1-201ENST00000620067 1252 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AC015804.1-201ENST00000622935 435 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 ZNF137P-201ENST00000456718 1920 ntBASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 OR4E2-202ENST00000641524 2855 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
SCN4BQ8IWT1 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 KARSP3-201ENST00000571212 1504 ntBASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 MTND4P10-201ENST00000446199 1363 ntBASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 AC011155.1-201ENST00000316512 456 ntBASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 RNU4-92P-201ENST00000363783 136 ntBASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 OR52E6-202ENST00000379946 954 ntBASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 RNA5SP397-201ENST00000391323 118 ntBASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 ARL4AP5-201ENST00000404372 599 ntBASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 U3.35-201ENST00000408405 208 ntBASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 HMGB1P49-201ENST00000418882 569 ntBASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 EIF4HP2-201ENST00000424380 563 ntBASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 HMGN2P27-201ENST00000427352 270 ntBASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 NANOGP2-201ENST00000435391 727 ntBASIC4.92□□□□□ -1.62
SCN4BQ8IWT1 HMGB1P45-201ENST00000435986 653 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms