Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 MTND2P39-201ENST00000457230 764 ntBASIC4.1□□□□□ -1.75
CCDC71Q8IV32 SCARNA10-201ENST00000459255 330 ntBASIC4.1□□□□□ -1.75
CCDC71Q8IV32 RPL23AP2-201ENST00000471227 466 ntBASIC4.1□□□□□ -1.75
CCDC71Q8IV32 AC020898.1-201ENST00000474167 787 ntBASIC4.1□□□□□ -1.75
CCDC71Q8IV32 AC092902.1-201ENST00000486999 259 ntBASIC4.1□□□□□ -1.75
CCDC71Q8IV32 PTPN20-213ENST00000502705 854 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 AC008083.2-201ENST00000546707 476 ntBASIC4.1□□□□□ -1.75
CCDC71Q8IV32 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 AC115286.1-201ENST00000604298 434 ntBASIC4.1□□□□□ -1.75
CCDC71Q8IV32 AC090948.1-201ENST00000607464 549 ntBASIC4.1□□□□□ -1.75
CCDC71Q8IV32 AC023813.4-201ENST00000607580 580 ntBASIC4.1□□□□□ -1.75
CCDC71Q8IV32 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 MIR6715B-201ENST00000637172 77 ntBASIC4.1□□□□□ -1.75
CCDC71Q8IV32 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.1□□□□□ -1.75
CCDC71Q8IV32 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 RNA5SP307-201ENST00000362863 116 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 OR6C69P-201ENST00000394268 893 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 RPL23AP59-201ENST00000399415 461 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 SNORA74C-2-201ENST00000411179 201 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 VN1R42P-201ENST00000424651 344 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 MTCO1P52-201ENST00000433928 531 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 YWHAZP2-201ENST00000440317 728 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 HMGB1P26-201ENST00000452520 628 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 SETP6-201ENST00000479329 568 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 SNORA31.13-201ENST00000516624 135 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 DEFB109D-201ENST00000529497 240 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AC135001.1-201ENST00000544546 283 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 MIR1254-2-201ENST00000579553 63 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 MIR3138-201ENST00000585238 82 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AC011477.5-201ENST00000586571 259 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 DNAJC19P3-201ENST00000594491 331 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 BPIFA4P-203ENST00000603168 689 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 MTATP6P2-201ENST00000603319 678 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AC010857.1-201ENST00000606398 594 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AC090948.2-201ENST00000607363 564 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AP000943.4-201ENST00000622912 357 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AC007546.2-201ENST00000623996 360 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AC024023.1-201ENST00000624530 922 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 AC106858.1-201ENST00000637497 429 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 FTO-223ENST00000640179 210 ntTSL 5 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 OR11H5P-202ENST00000641612 1325 ntBASIC4.09□□□□□ -1.75
CCDC71Q8IV32 LINC00862-201ENST00000367355 1417 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CCDC71Q8IV32 NOL8P1-201ENST00000508336 3529 ntBASIC4.09□□□□□ -1.76
CCDC71Q8IV32 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.09□□□□□ -1.76
CCDC71Q8IV32 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
CCDC71Q8IV32 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.09□□□□□ -1.76
CCDC71Q8IV32 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC71Q8IV32 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC71Q8IV32 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.08□□□□□ -1.76
CCDC71Q8IV32 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC71Q8IV32 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.08□□□□□ -1.76
CCDC71Q8IV32 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.08□□□□□ -1.76
CCDC71Q8IV32 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC4.08□□□□□ -1.76
CCDC71Q8IV32 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
CCDC71Q8IV32 RNU6-225P-201ENST00000384613 103 ntBASIC4.08□□□□□ -1.76
CCDC71Q8IV32 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.08□□□□□ -1.76
CCDC71Q8IV32 RNA5SP104-201ENST00000410989 118 ntBASIC4.08□□□□□ -1.76
CCDC71Q8IV32 AC105402.1-201ENST00000413336 545 ntBASIC4.08□□□□□ -1.76
CCDC71Q8IV32 AL158825.1-201ENST00000414735 521 ntBASIC4.08□□□□□ -1.76
CCDC71Q8IV32 AL356387.2-201ENST00000422272 243 ntBASIC4.08□□□□□ -1.76
CCDC71Q8IV32 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC4.08□□□□□ -1.76
CCDC71Q8IV32 RPS12P10-201ENST00000427031 377 ntBASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms