Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC006512.2-201ENST00000543250 486 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 TRAV15-201ENST00000556680 249 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC007495.2-202ENST00000564102 535 ntTSL 4 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 FRG2DP-202ENST00000566967 323 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 MIR4742-201ENST00000581069 85 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AP001823.1-201ENST00000604056 1003 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC124916.2-201ENST00000604416 224 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 MIR98-201ENST00000606724 119 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC141002.1-201ENST00000607025 279 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AP006248.2-201ENST00000623309 592 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AC073488.6-201ENST00000632293 754 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 MTND4LP32-201ENST00000636111 270 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 AP003486.1-201ENST00000525716 3994 ntBASIC5.58□□□□□ -1.52
ATG4DQ86TL0 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
ATG4DQ86TL0 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 AL449283.1-201ENST00000602631 3403 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 RNU6-1066P-201ENST00000363573 105 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 RNU1-59P-201ENST00000364829 162 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 SNORA69-201ENST00000383895 132 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 SNORA70.9-201ENST00000384370 135 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 RNU6-308P-201ENST00000390957 107 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 RNU6-510P-201ENST00000391239 108 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 NDUFB4P5-201ENST00000415445 361 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 HSPE1P16-201ENST00000426640 348 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 RPS27AP6-201ENST00000427962 448 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 MTCYBP9-201ENST00000431021 303 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 AC109583.1-201ENST00000432156 268 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 SNRPEP4-201ENST00000435815 279 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 RPL23AP60-201ENST00000450011 454 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 MRPS17P3-201ENST00000465453 385 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 AC006390.1-201ENST00000508068 283 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 RN7SKP256-201ENST00000517201 314 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 DEFB131D-201ENST00000526803 184 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 SLC2A13P1-201ENST00000531560 322 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 ARL6IP1P1-201ENST00000545836 610 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 AL845552.1-201ENST00000556820 323 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 CYCSP2-201ENST00000558168 301 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.57□□□□□ -1.52
ATG4DQ86TL0 CKS1BP3-201ENST00000600888 237 ntBASIC5.57□□□□□ -1.52
ATG4DQ86TL0 AC068790.5-201ENST00000602741 355 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 83.6 ms