Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 MIR4646-201ENST00000580775 63 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AC006272.2-201ENST00000594725 163 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AP001981.2-201ENST00000603241 418 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 MTCO2P22-201ENST00000603246 681 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AC072039.2-201ENST00000608883 439 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AL445423.1-201ENST00000609941 536 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AL354976.1-201ENST00000613843 387 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AL158163.2-201ENST00000619110 700 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AC011815.3-201ENST00000624194 473 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 AC104446.1-201ENST00000613728 1321 ntBASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 ATP2C1-212ENST00000507488 3579 ntAPPRIS ALT2 TSL 2 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.63□□□□□ -1.67
ZNF549Q6P9A3 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 RNU1-87P-201ENST00000363727 170 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 Y_RNA.194-201ENST00000363985 102 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AL121978.1-201ENST00000402778 359 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AC233289.1-201ENST00000403700 508 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 RN7SKP100-201ENST00000411258 284 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 BTF3P8-201ENST00000414577 526 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AC016769.2-201ENST00000414815 475 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 PTP4A1P1-201ENST00000420539 515 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 PRELID3BP10-201ENST00000431957 584 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AC005154.2-201ENST00000438110 379 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 MTCYBP42-201ENST00000444653 1130 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 CASP3P1-201ENST00000446037 609 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 OR1H1P-201ENST00000448731 937 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 RN7SL610P-201ENST00000463845 291 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AC090142.1-201ENST00000465776 462 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 RN7SL329P-201ENST00000467740 299 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AC098583.1-201ENST00000480875 255 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AC025164.1-201ENST00000496249 478 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AC025459.1-201ENST00000504072 156 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 RN7SKP276-201ENST00000516242 268 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AC023161.2-201ENST00000551218 780 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AL049875.1-201ENST00000554328 582 ntTSL 4 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 SETP1-201ENST00000556014 845 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 RN7SL652P-201ENST00000577769 300 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AC073091.2-201ENST00000603205 907 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AC005086.4-201ENST00000623065 213 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 AC079248.2-201ENST00000623779 326 ntBASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
ZNF549Q6P9A3 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AL136164.3-201ENST00000624429 3978 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AL355852.1-201ENST00000454081 1771 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC092435.4-201ENST00000623012 4159 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC010132.2-201ENST00000295493 1043 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 RNU4-75P-201ENST00000364621 146 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 ATP5F1P3-201ENST00000397213 657 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AL021407.1-201ENST00000404531 386 ntBASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.61□□□□□ -1.67
ZNF549Q6P9A3 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms