Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC3.97□□□□□ -1.77
NIPAL3Q6P499 RPEP3-201ENST00000425462 676 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.97□□□□□ -1.77
NIPAL3Q6P499 ABCF2P2-201ENST00000450549 296 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 NDUFS5P3-201ENST00000450668 321 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 AC010469.1-201ENST00000463864 576 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 RN7SL738P-201ENST00000470264 297 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.97□□□□□ -1.77
NIPAL3Q6P499 AC008565.1-201ENST00000509046 885 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 CDH12P4-201ENST00000517835 295 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 CDH12P3-201ENST00000517935 295 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 CDH12P1-201ENST00000518435 295 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC3.97□□□□□ -1.77
NIPAL3Q6P499 C1DP5-201ENST00000525775 383 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 PHBP17-201ENST00000528576 541 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 MIR4330-201ENST00000579077 105 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 AP005119.2-201ENST00000579735 1105 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.97□□□□□ -1.77
NIPAL3Q6P499 RPL12P25-202ENST00000598100 674 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 AC008638.3-201ENST00000603341 463 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 AC008782.1-201ENST00000603386 430 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 AC115621.1-201ENST00000604653 858 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 OR2BH1P-201ENST00000608850 864 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 AC119744.1-201ENST00000454746 1715 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
NIPAL3Q6P499 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
NIPAL3Q6P499 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NIPAL3Q6P499 RAD17P1-201ENST00000418130 2042 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 AC011266.1-201ENST00000624119 3569 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 AL132640.2-201ENST00000559968 1698 ntBASIC3.97□□□□□ -1.77
NIPAL3Q6P499 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
NIPAL3Q6P499 AL592182.3-201ENST00000642132 3304 ntBASIC3.96□□□□□ -1.77
NIPAL3Q6P499 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.96□□□□□ -1.77
NIPAL3Q6P499 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 RNA5SP27-201ENST00000363839 119 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 MIR93-201ENST00000385024 80 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 MIR513A2-201ENST00000385249 127 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 RPS4XP9-201ENST00000405151 780 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 ATF1P1-201ENST00000406040 927 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 RPL26P29-201ENST00000415623 438 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 GAPDHP49-201ENST00000421421 961 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 ETF1P3-201ENST00000430422 1160 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 RPS29P33-201ENST00000456717 146 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 RFESD-208ENST00000513950 464 ntTSL 5 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 IGLVIV-65-201ENST00000517313 360 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 OR5M7P-201ENST00000526140 972 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 CR383656.6-201ENST00000550518 394 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 AC090312.2-201ENST00000582687 378 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 AC104785.1-201ENST00000603220 588 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 MIR6820-201ENST00000611508 62 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 AL035461.2-201ENST00000619201 524 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 AC138907.10-201ENST00000623708 983 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 AC017007.4-201ENST00000503353 1352 ntBASIC3.96□□□□□ -1.78
NIPAL3Q6P499 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
NIPAL3Q6P499 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NIPAL3Q6P499 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC3.95□□□□□ -1.78
NIPAL3Q6P499 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.95□□□□□ -1.78
NIPAL3Q6P499 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.95□□□□□ -1.78
NIPAL3Q6P499 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
NIPAL3Q6P499 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.95□□□□□ -1.78
NIPAL3Q6P499 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
NIPAL3Q6P499 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.95□□□□□ -1.78
NIPAL3Q6P499 RNU6-543P-201ENST00000362576 108 ntBASIC3.95□□□□□ -1.78
NIPAL3Q6P499 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.95□□□□□ -1.78
NIPAL3Q6P499 MIR129-1-201ENST00000384972 72 ntBASIC3.95□□□□□ -1.78
NIPAL3Q6P499 AGR3-202ENST00000402239 563 ntTSL 2 BASIC3.95□□□□□ -1.78
NIPAL3Q6P499 SNORA11B-201ENST00000408175 129 ntBASIC3.95□□□□□ -1.78
NIPAL3Q6P499 RNA5SP104-201ENST00000410989 118 ntBASIC3.95□□□□□ -1.78
NIPAL3Q6P499 AC092745.2-202ENST00000411880 369 ntBASIC3.95□□□□□ -1.78
NIPAL3Q6P499 AC004987.3-201ENST00000413879 771 ntBASIC3.95□□□□□ -1.78
NIPAL3Q6P499 AC114814.2-201ENST00000419195 485 ntBASIC3.95□□□□□ -1.78
NIPAL3Q6P499 VN1R42P-201ENST00000424651 344 ntBASIC3.95□□□□□ -1.78
NIPAL3Q6P499 AC093422.3-201ENST00000428506 305 ntBASIC3.95□□□□□ -1.78
NIPAL3Q6P499 RPL23AP1-201ENST00000428990 471 ntBASIC3.95□□□□□ -1.78
NIPAL3Q6P499 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC3.95□□□□□ -1.78
NIPAL3Q6P499 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms