Protein–RNA interactions for Protein: Q53GD3

SLC44A4, Choline transporter-like protein 4, humanhuman

Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4Q53GD3 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 B3GNT5-201ENST00000326505 4123 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 SGO1P1-201ENST00000603525 1447 ntBASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
SLC44A4Q53GD3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 DDX18P5-201ENST00000534547 1306 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 ADGRL3-217ENST00000514591 6297 ntAPPRIS P2 TSL 5 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC126755.2-208ENST00000327792 462 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC138969.1-213ENST00000331436 462 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 GSTA8P-201ENST00000404253 637 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 RNU2-6P-201ENST00000411404 190 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC011233.1-201ENST00000422812 283 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC073069.1-201ENST00000428657 441 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 MTCO3P5-201ENST00000433620 714 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 HMGB1P48-201ENST00000446155 598 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC104978.1-201ENST00000449387 391 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 RAP1BP2-201ENST00000478270 544 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC015724.1-201ENST00000478577 156 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 OR2A20P-203ENST00000498397 1268 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 DYNLL1P6-201ENST00000503440 264 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 OR5H4P-201ENST00000510851 923 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC091912.1-201ENST00000511351 248 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 RN7SKP283-201ENST00000517197 270 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 LY96-202ENST00000518893 430 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 GCSHP4-201ENST00000538792 439 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 ERP27-202ENST00000540097 993 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC091042.1-201ENST00000579213 173 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC090312.2-201ENST00000582687 378 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 NTAN1P1-201ENST00000603150 646 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC023509.5-201ENST00000617434 807 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC007490.1-201ENST00000624321 703 ntBASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC5.29□□□□□ -1.56
SLC44A4Q53GD3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC100757.1-201ENST00000616872 1835 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 C11orf74-202ENST00000347206 633 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC135895.1-201ENST00000360528 1058 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 UBBP2-201ENST00000376781 231 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 OR52E6-202ENST00000379946 954 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 RPL7P53-201ENST00000421245 739 ntBASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC5.28□□□□□ -1.56
SLC44A4Q53GD3 AL133217.1-201ENST00000450980 425 ntBASIC5.28□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms