Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK3Q00526 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.43□□□□□ -1.7
CDK3Q00526 AC093840.1-201ENST00000511599 336 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 AC107918.3-201ENST00000533272 382 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDK3Q00526 AC009948.4-201ENST00000604692 675 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 AC073387.2-201ENST00000604797 784 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.43□□□□□ -1.7
CDK3Q00526 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK3Q00526 AC234782.5-201ENST00000617723 324 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK3Q00526 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CDK3Q00526 BX649567.1-201ENST00000642071 1134 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK3Q00526 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CDK3Q00526 OTC-201ENST00000039007 1585 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDK3Q00526 MAPK10-286ENST00000641208 8747 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.43□□□□□ -1.7
CDK3Q00526 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
CDK3Q00526 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CDK3Q00526 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
CDK3Q00526 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CDK3Q00526 AC092162.3-201ENST00000624511 1624 ntBASIC4.43□□□□□ -1.7
CDK3Q00526 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDK3Q00526 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDK3Q00526 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CDK3Q00526 OR51H2P-202ENST00000641424 3046 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDK3Q00526 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDK3Q00526 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDK3Q00526 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDK3Q00526 RPL32P3-201ENST00000359025 275 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 RNU1-130P-201ENST00000363930 160 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 SNORA62-201ENST00000365493 153 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 MIR921-201ENST00000401133 56 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 RAB28P1-201ENST00000411517 641 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 LIPT1P1-201ENST00000415870 1186 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.42□□□□□ -1.7
CDK3Q00526 USP9YP21-201ENST00000420603 432 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 COX6CP17-201ENST00000421389 185 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 CHIAP3-201ENST00000423668 1133 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 RPL21P91-201ENST00000429231 479 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 AC011998.1-201ENST00000433403 117 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC4.42□□□□□ -1.7
CDK3Q00526 LINC00189-203ENST00000447125 783 ntTSL 3 BASIC4.42□□□□□ -1.7
CDK3Q00526 AC119744.1-201ENST00000454746 1715 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 RN7SL810P-201ENST00000493031 276 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 AC096571.1-202ENST00000506634 735 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 AC119751.1-201ENST00000513357 765 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.42□□□□□ -1.7
CDK3Q00526 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.42□□□□□ -1.7
CDK3Q00526 AC008562.1-201ENST00000521763 330 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 AC124293.1-201ENST00000530034 493 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CDK3Q00526 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDK3Q00526 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK3Q00526 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDK3Q00526 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.42□□□□□ -1.7
CDK3Q00526 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.42□□□□□ -1.7
CDK3Q00526 MTCO1P40-201ENST00000574371 625 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.42□□□□□ -1.7
CDK3Q00526 PCNAP1-202ENST00000595299 752 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 IMMP1LP1-201ENST00000605170 488 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 AC008966.2-201ENST00000606157 453 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 AC027449.1-201ENST00000608890 407 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.42□□□□□ -1.7
CDK3Q00526 AC090912.3-201ENST00000609775 533 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 MIR6798-201ENST00000612887 67 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.42□□□□□ -1.7
CDK3Q00526 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
CDK3Q00526 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CDK3Q00526 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CDK3Q00526 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CDK3Q00526 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.42□□□□□ -1.7
CDK3Q00526 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CDK3Q00526 AC106754.1-201ENST00000562632 1513 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CDK3Q00526 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CDK3Q00526 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CDK3Q00526 FAM3C2-201ENST00000312214 681 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK3Q00526 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CDK3Q00526 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.41□□□□□ -1.7
CDK3Q00526 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CDK3Q00526 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK3Q00526 RNU6-77P-201ENST00000410554 91 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 SNRPFP1-201ENST00000414761 252 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 OR13Z1P-201ENST00000416141 834 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK3Q00526 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK3Q00526 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK3Q00526 AL158837.1-201ENST00000417644 452 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK3Q00526 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.41□□□□□ -1.7
CDK3Q00526 SCP2-206ENST00000430330 938 ntTSL 2 BASIC4.41□□□□□ -1.7
CDK3Q00526 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC4.41□□□□□ -1.7
CDK3Q00526 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK3Q00526 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC4.41□□□□□ -1.7
CDK3Q00526 CBX1P1-201ENST00000440184 427 ntBASIC4.41□□□□□ -1.7
CDK3Q00526 DHFRP3-201ENST00000455595 559 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms