Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 AC004975.1-201ENST00000428733 208 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.57□□□□□ -1.84
H3F3AP84243 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.57□□□□□ -1.84
H3F3AP84243 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.57□□□□□ -1.84
H3F3AP84243 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
H3F3AP84243 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.57□□□□□ -1.84
H3F3AP84243 EXTL2P1-201ENST00000446218 416 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.57□□□□□ -1.84
H3F3AP84243 RPL7P31-201ENST00000450192 724 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 HMGB3P21-201ENST00000452483 547 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 AC069277.2-201ENST00000454211 432 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.57□□□□□ -1.84
H3F3AP84243 AL132838.2-201ENST00000492041 314 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.57□□□□□ -1.84
H3F3AP84243 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.57□□□□□ -1.84
H3F3AP84243 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.57□□□□□ -1.84
H3F3AP84243 MTCO1P35-201ENST00000515270 228 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC3.57□□□□□ -1.84
H3F3AP84243 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.57□□□□□ -1.84
H3F3AP84243 AC007224.1-201ENST00000564410 144 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.57□□□□□ -1.84
H3F3AP84243 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.57□□□□□ -1.84
H3F3AP84243 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC3.57□□□□□ -1.84
H3F3AP84243 MIR4697-201ENST00000582977 78 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 SNX6P1-201ENST00000601728 1224 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.57□□□□□ -1.84
H3F3AP84243 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.57□□□□□ -1.84
H3F3AP84243 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC3.57□□□□□ -1.84
H3F3AP84243 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
H3F3AP84243 AC009452.1-201ENST00000640823 606 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 OR5BE1P-202ENST00000641168 1176 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.57□□□□□ -1.84
H3F3AP84243 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.56□□□□□ -1.84
H3F3AP84243 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.56□□□□□ -1.84
H3F3AP84243 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
H3F3AP84243 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
H3F3AP84243 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC3.56□□□□□ -1.84
H3F3AP84243 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.56□□□□□ -1.84
H3F3AP84243 RNA5SP399-201ENST00000364003 117 ntBASIC3.56□□□□□ -1.84
H3F3AP84243 RNU6-233P-201ENST00000410845 141 ntBASIC3.56□□□□□ -1.84
H3F3AP84243 RNA5SP306-201ENST00000411087 107 ntBASIC3.56□□□□□ -1.84
H3F3AP84243 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC3.56□□□□□ -1.84
H3F3AP84243 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
H3F3AP84243 AC011742.1-201ENST00000431448 434 ntBASIC3.56□□□□□ -1.84
H3F3AP84243 TBCAP1-201ENST00000436520 327 ntBASIC3.56□□□□□ -1.84
H3F3AP84243 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.56□□□□□ -1.84
H3F3AP84243 AL645939.1-201ENST00000453429 797 ntBASIC3.56□□□□□ -1.84
H3F3AP84243 TPT1P3-201ENST00000492841 512 ntBASIC3.56□□□□□ -1.84
H3F3AP84243 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.56□□□□□ -1.84
H3F3AP84243 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
H3F3AP84243 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC3.56□□□□□ -1.84
H3F3AP84243 ZFAND1-208ENST00000519523 698 ntTSL 2 BASIC3.56□□□□□ -1.84
H3F3AP84243 NDUFA5P2-201ENST00000519723 344 ntBASIC3.56□□□□□ -1.84
H3F3AP84243 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC3.56□□□□□ -1.84
H3F3AP84243 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC3.56□□□□□ -1.84
H3F3AP84243 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.56□□□□□ -1.84
H3F3AP84243 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.56□□□□□ -1.84
H3F3AP84243 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.56□□□□□ -1.84
H3F3AP84243 AC015722.2-201ENST00000622210 551 ntBASIC3.56□□□□□ -1.84
H3F3AP84243 AC124312.6-202ENST00000623624 418 ntBASIC3.56□□□□□ -1.84
H3F3AP84243 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.56□□□□□ -1.84
H3F3AP84243 AC016717.3-201ENST00000624730 554 ntBASIC3.56□□□□□ -1.84
H3F3AP84243 EFR3A-208ENST00000637848 2547 ntTSL 5 BASIC3.56□□□□□ -1.84
H3F3AP84243 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
H3F3AP84243 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
H3F3AP84243 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.56□□□□□ -1.84
H3F3AP84243 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.56□□□□□ -1.84
H3F3AP84243 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.55□□□□□ -1.84
H3F3AP84243 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
H3F3AP84243 MAPK10-253ENST00000641010 4072 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 SPRR2C-201ENST00000290702 219 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 RNA5SP322-201ENST00000363617 119 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 RNU6-304P-201ENST00000364855 107 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 PPIAP31-201ENST00000405422 495 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 RPL21P65-201ENST00000406094 466 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC3.55□□□□□ -1.84
H3F3AP84243 AL691449.1-201ENST00000426570 421 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 HIGD1AP4-201ENST00000430194 280 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.55□□□□□ -1.84
H3F3AP84243 TPTE2P3-201ENST00000441562 1189 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC3.55□□□□□ -1.84
H3F3AP84243 HMGB3P22-202ENST00000451823 572 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC3.55□□□□□ -1.84
H3F3AP84243 AC103987.1-201ENST00000473394 348 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.55□□□□□ -1.84
H3F3AP84243 HAUS1P1-201ENST00000505275 832 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.55□□□□□ -1.84
H3F3AP84243 SNORD116-26-201ENST00000516006 96 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.55□□□□□ -1.84
H3F3AP84243 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.55□□□□□ -1.84
H3F3AP84243 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC3.55□□□□□ -1.84
H3F3AP84243 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC3.55□□□□□ -1.84
H3F3AP84243 GNRHR2P1-201ENST00000555315 631 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.55□□□□□ -1.84
H3F3AP84243 AC009101.1-201ENST00000568135 242 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 AC141257.3-201ENST00000572906 215 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 MIR4716-201ENST00000579628 84 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 PSMA6P4-201ENST00000603247 718 ntBASIC3.55□□□□□ -1.84
H3F3AP84243 AC020910.2-201ENST00000603635 610 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 144.8 ms