Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LSM3P62310 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.26□□□□□ -1.89
LSM3P62310 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
LSM3P62310 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LSM3P62310 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
LSM3P62310 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.26□□□□□ -1.89
LSM3P62310 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
LSM3P62310 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.26□□□□□ -1.89
LSM3P62310 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM3P62310 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LSM3P62310 RNA5SP87-201ENST00000384155 118 ntBASIC3.25□□□□□ -1.89
LSM3P62310 RNA5SP424-201ENST00000390988 115 ntBASIC3.25□□□□□ -1.89
LSM3P62310 RNU4-34P-201ENST00000410431 124 ntBASIC3.25□□□□□ -1.89
LSM3P62310 MTND4P22-201ENST00000413116 1169 ntBASIC3.25□□□□□ -1.89
LSM3P62310 RPS26P13-201ENST00000419030 330 ntBASIC3.25□□□□□ -1.89
LSM3P62310 AP000907.1-201ENST00000428428 510 ntBASIC3.25□□□□□ -1.89
LSM3P62310 CASP3P1-201ENST00000446037 609 ntBASIC3.25□□□□□ -1.89
LSM3P62310 AC125238.1-201ENST00000448842 249 ntBASIC3.25□□□□□ -1.89
LSM3P62310 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM3P62310 MTND6P32-201ENST00000457611 483 ntBASIC3.25□□□□□ -1.89
LSM3P62310 RPL21P71-201ENST00000465598 459 ntBASIC3.25□□□□□ -1.89
LSM3P62310 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
LSM3P62310 NDUFB5P1-201ENST00000508134 564 ntBASIC3.25□□□□□ -1.89
LSM3P62310 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.25□□□□□ -1.89
LSM3P62310 SNORA70.14-201ENST00000516205 110 ntBASIC3.25□□□□□ -1.89
LSM3P62310 MIR2276-201ENST00000516886 89 ntBASIC3.25□□□□□ -1.89
LSM3P62310 IGLV2-28-201ENST00000520681 304 ntBASIC3.25□□□□□ -1.89
LSM3P62310 AP000676.2-201ENST00000529711 301 ntBASIC3.25□□□□□ -1.89
LSM3P62310 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM3P62310 TOMM20P2-201ENST00000540082 421 ntBASIC3.25□□□□□ -1.89
LSM3P62310 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM3P62310 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.25□□□□□ -1.89
LSM3P62310 AC018552.3-201ENST00000567416 561 ntBASIC3.25□□□□□ -1.89
LSM3P62310 VN1R79P-201ENST00000593540 513 ntBASIC3.25□□□□□ -1.89
LSM3P62310 AL139041.1-201ENST00000605480 610 ntBASIC3.25□□□□□ -1.89
LSM3P62310 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC3.25□□□□□ -1.89
LSM3P62310 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.25□□□□□ -1.89
LSM3P62310 AC090229.1-201ENST00000590983 1609 ntBASIC3.25□□□□□ -1.89
LSM3P62310 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM3P62310 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM3P62310 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
LSM3P62310 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
LSM3P62310 LARP1BP1-201ENST00000506036 1359 ntBASIC3.25□□□□□ -1.89
LSM3P62310 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.24□□□□□ -1.89
LSM3P62310 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
LSM3P62310 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LSM3P62310 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LSM3P62310 ZNF542P-204ENST00000482727 1305 ntBASIC3.24□□□□□ -1.89
LSM3P62310 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.24□□□□□ -1.89
LSM3P62310 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
LSM3P62310 RN7SKP44-201ENST00000363602 316 ntBASIC3.24□□□□□ -1.89
LSM3P62310 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LSM3P62310 AC104297.1-201ENST00000393779 870 ntBASIC3.24□□□□□ -1.89
LSM3P62310 RNU4-6P-201ENST00000410804 122 ntBASIC3.24□□□□□ -1.89
LSM3P62310 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC3.24□□□□□ -1.89
LSM3P62310 OSTCP5-201ENST00000425293 453 ntBASIC3.24□□□□□ -1.89
LSM3P62310 MRPS18BP2-201ENST00000434310 759 ntBASIC3.24□□□□□ -1.89
LSM3P62310 RPS20P1-201ENST00000434853 354 ntBASIC3.24□□□□□ -1.89
LSM3P62310 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LSM3P62310 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.24□□□□□ -1.89
LSM3P62310 FTH1P1-201ENST00000437933 532 ntBASIC3.24□□□□□ -1.89
LSM3P62310 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.24□□□□□ -1.89
LSM3P62310 AL645931.1-201ENST00000439737 410 ntBASIC3.24□□□□□ -1.89
LSM3P62310 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.24□□□□□ -1.89
LSM3P62310 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC3.24□□□□□ -1.89
LSM3P62310 AL035551.1-201ENST00000446931 348 ntBASIC3.24□□□□□ -1.89
LSM3P62310 RPL7P61-201ENST00000451721 751 ntBASIC3.24□□□□□ -1.89
LSM3P62310 ANP32BP2-201ENST00000454525 545 ntBASIC3.24□□□□□ -1.89
LSM3P62310 HMGN1P18-201ENST00000457642 277 ntBASIC3.24□□□□□ -1.89
LSM3P62310 RPS27P29-201ENST00000463110 252 ntBASIC3.24□□□□□ -1.89
LSM3P62310 RN7SL330P-201ENST00000469709 307 ntBASIC3.24□□□□□ -1.89
LSM3P62310 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC3.24□□□□□ -1.89
LSM3P62310 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.24□□□□□ -1.89
LSM3P62310 NDUFA5P2-201ENST00000519723 344 ntBASIC3.24□□□□□ -1.89
LSM3P62310 AP006245.1-201ENST00000522549 120 ntBASIC3.24□□□□□ -1.89
LSM3P62310 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.24□□□□□ -1.89
LSM3P62310 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.24□□□□□ -1.89
LSM3P62310 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC3.24□□□□□ -1.89
LSM3P62310 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC3.24□□□□□ -1.89
LSM3P62310 AL389895.1-201ENST00000554127 252 ntBASIC3.24□□□□□ -1.89
LSM3P62310 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.24□□□□□ -1.89
LSM3P62310 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
LSM3P62310 AC009948.4-201ENST00000604692 675 ntBASIC3.24□□□□□ -1.89
LSM3P62310 AC068870.2-201ENST00000620635 389 ntBASIC3.24□□□□□ -1.89
LSM3P62310 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.24□□□□□ -1.89
LSM3P62310 PDCD6IPP1-202ENST00000622242 1064 ntBASIC3.24□□□□□ -1.89
LSM3P62310 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC3.24□□□□□ -1.89
LSM3P62310 CGA-206ENST00000630630 832 ntTSL 2 BASIC3.24□□□□□ -1.89
LSM3P62310 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.24□□□□□ -1.89
LSM3P62310 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LSM3P62310 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
LSM3P62310 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC3.24□□□□□ -1.89
LSM3P62310 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
LSM3P62310 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LSM3P62310 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.23□□□□□ -1.89
LSM3P62310 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.23□□□□□ -1.89
LSM3P62310 AC107021.2-201ENST00000567714 2095 ntBASIC3.23□□□□□ -1.89
LSM3P62310 AC007685.1-201ENST00000329806 452 ntBASIC3.23□□□□□ -1.89
LSM3P62310 MIR383-201ENST00000362257 73 ntBASIC3.23□□□□□ -1.89
LSM3P62310 RNA5SP31-201ENST00000411144 127 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms