Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 AC091305.2-201ENST00000624049 1576 ntBASIC4.94□□□□□ -1.62
CLRN1P58418 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLRN1P58418 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLRN1P58418 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLRN1P58418 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC4.94□□□□□ -1.62
CLRN1P58418 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLRN1P58418 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.94□□□□□ -1.62
CLRN1P58418 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
CLRN1P58418 AC097063.1-201ENST00000426714 1797 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.93□□□□□ -1.62
CLRN1P58418 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.93□□□□□ -1.62
CLRN1P58418 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.93□□□□□ -1.62
CLRN1P58418 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLRN1P58418 AL355834.1-201ENST00000556602 3965 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLRN1P58418 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLRN1P58418 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLRN1P58418 OR4G2P-201ENST00000328113 903 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AGBL4-201ENST00000334103 881 ntTSL 5 BASIC4.93□□□□□ -1.62
CLRN1P58418 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLRN1P58418 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLRN1P58418 RPS24P12-201ENST00000402084 394 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 GAPDHP42-201ENST00000406848 981 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 RNU2-28P-201ENST00000410457 189 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AC002524.1-201ENST00000411687 547 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 RPSAP35-201ENST00000413753 818 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AL139128.1-201ENST00000413921 941 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC4.93□□□□□ -1.62
CLRN1P58418 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.93□□□□□ -1.62
CLRN1P58418 AC083875.1-201ENST00000419509 405 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 RPS27AP14-201ENST00000422868 454 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AL158073.1-201ENST00000426848 1104 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.93□□□□□ -1.62
CLRN1P58418 ZYG11AP1-201ENST00000430329 837 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AC010881.1-201ENST00000433830 235 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC4.93□□□□□ -1.62
CLRN1P58418 ACTR3P2-201ENST00000439585 1257 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC4.93□□□□□ -1.62
CLRN1P58418 EEF1B2P6-201ENST00000445713 673 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 PDSS1P2-201ENST00000449397 678 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC4.93□□□□□ -1.62
CLRN1P58418 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC4.93□□□□□ -1.62
CLRN1P58418 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC4.93□□□□□ -1.62
CLRN1P58418 UBFD1P1-201ENST00000473259 814 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 SNRPCP3-201ENST00000474888 476 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 RN7SL583P-201ENST00000475692 287 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 RPL21P6-201ENST00000479171 504 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC4.93□□□□□ -1.62
CLRN1P58418 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.93□□□□□ -1.62
CLRN1P58418 RNA5SP216-201ENST00000516111 123 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC4.93□□□□□ -1.62
CLRN1P58418 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC4.93□□□□□ -1.62
CLRN1P58418 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.93□□□□□ -1.62
CLRN1P58418 MED28P5-201ENST00000528254 438 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 TRIM51DP-201ENST00000529746 596 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AHI1-217ENST00000534469 680 ntTSL 3 BASIC4.93□□□□□ -1.62
CLRN1P58418 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC4.93□□□□□ -1.62
CLRN1P58418 NMNAT1P1-201ENST00000554095 876 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AL049872.1-201ENST00000556323 322 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.93□□□□□ -1.62
CLRN1P58418 TPRKBP2-201ENST00000565969 475 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.93□□□□□ -1.62
CLRN1P58418 AC141257.3-201ENST00000572906 215 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.93□□□□□ -1.62
CLRN1P58418 MYLK-221ENST00000583087 678 ntTSL 4 BASIC4.93□□□□□ -1.62
CLRN1P58418 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC4.93□□□□□ -1.62
CLRN1P58418 AP000403.1-201ENST00000603349 851 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AC098614.4-201ENST00000607601 462 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AC103710.4-201ENST00000609301 899 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AC025574.2-201ENST00000615621 514 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 MIR6133-201ENST00000617057 108 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC4.93□□□□□ -1.62
CLRN1P58418 AL603839.4-201ENST00000624658 1005 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.93□□□□□ -1.62
CLRN1P58418 AC244258.1-201ENST00000637553 1071 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC4.93□□□□□ -1.62
CLRN1P58418 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLRN1P58418 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLRN1P58418 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.93□□□□□ -1.62
CLRN1P58418 MTND5P26-201ENST00000426018 1752 ntBASIC4.93□□□□□ -1.62
CLRN1P58418 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CLRN1P58418 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CLRN1P58418 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC4.93□□□□□ -1.62
CLRN1P58418 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.93□□□□□ -1.62
CLRN1P58418 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
CLRN1P58418 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC4.93□□□□□ -1.62
CLRN1P58418 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC4.93□□□□□ -1.62
CLRN1P58418 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
CLRN1P58418 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLRN1P58418 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC4.92□□□□□ -1.62
CLRN1P58418 TCP11X1-202ENST00000622971 1372 ntBASIC4.92□□□□□ -1.62
CLRN1P58418 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLRN1P58418 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLRN1P58418 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC4.92□□□□□ -1.62
CLRN1P58418 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.92□□□□□ -1.62
CLRN1P58418 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLRN1P58418 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC4.92□□□□□ -1.62
CLRN1P58418 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
CLRN1P58418 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms