Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 MRPL49P2-201ENST00000521066 465 ntBASIC3.92□□□□□ -1.78
LIM2P55344 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC3.92□□□□□ -1.78
LIM2P55344 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC3.92□□□□□ -1.78
LIM2P55344 AC025918.2-201ENST00000558683 763 ntBASIC3.92□□□□□ -1.78
LIM2P55344 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC3.92□□□□□ -1.78
LIM2P55344 ELOCP34-201ENST00000604436 327 ntBASIC3.92□□□□□ -1.78
LIM2P55344 uc_338.9-201ENST00000617424 182 ntBASIC3.92□□□□□ -1.78
LIM2P55344 AC139769.3-201ENST00000618383 175 ntBASIC3.92□□□□□ -1.78
LIM2P55344 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
LIM2P55344 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC3.92□□□□□ -1.78
LIM2P55344 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC3.92□□□□□ -1.78
LIM2P55344 OR52H1-202ENST00000641796 1061 ntBASIC3.92□□□□□ -1.78
LIM2P55344 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC3.92□□□□□ -1.78
LIM2P55344 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LIM2P55344 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
LIM2P55344 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC3.91□□□□□ -1.78
LIM2P55344 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
LIM2P55344 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIM2P55344 AC116667.1-201ENST00000604855 2072 ntBASIC3.91□□□□□ -1.78
LIM2P55344 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIM2P55344 AC097504.1-201ENST00000515103 2415 ntBASIC3.91□□□□□ -1.78
LIM2P55344 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIM2P55344 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIM2P55344 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIM2P55344 AC068538.1-201ENST00000376856 336 ntBASIC3.91□□□□□ -1.78
LIM2P55344 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC3.91□□□□□ -1.78
LIM2P55344 RNU6-452P-201ENST00000384406 107 ntBASIC3.91□□□□□ -1.78
LIM2P55344 SNORA37-201ENST00000384504 129 ntBASIC3.91□□□□□ -1.78
LIM2P55344 LAP3P1-201ENST00000403648 294 ntBASIC3.91□□□□□ -1.78
LIM2P55344 RNA5SP39-201ENST00000411245 120 ntBASIC3.91□□□□□ -1.78
LIM2P55344 USP9YP19-201ENST00000412165 485 ntBASIC3.91□□□□□ -1.78
LIM2P55344 RPS26P47-201ENST00000427219 348 ntBASIC3.91□□□□□ -1.78
LIM2P55344 NANOGP6-201ENST00000429190 847 ntBASIC3.91□□□□□ -1.78
LIM2P55344 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC3.91□□□□□ -1.78
LIM2P55344 AC006011.1-201ENST00000442758 349 ntBASIC3.91□□□□□ -1.78
LIM2P55344 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.91□□□□□ -1.78
LIM2P55344 TPT1P12-201ENST00000448968 492 ntBASIC3.91□□□□□ -1.78
LIM2P55344 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC3.91□□□□□ -1.78
LIM2P55344 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIM2P55344 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC3.91□□□□□ -1.78
LIM2P55344 RPL36AP13-201ENST00000457490 317 ntBASIC3.91□□□□□ -1.78
LIM2P55344 RPL23AP12-201ENST00000467573 473 ntBASIC3.91□□□□□ -1.78
LIM2P55344 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIM2P55344 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.91□□□□□ -1.78
LIM2P55344 AC139783.2-201ENST00000504847 1145 ntBASIC3.91□□□□□ -1.78
LIM2P55344 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.91□□□□□ -1.78
LIM2P55344 AC010468.3-201ENST00000508225 458 ntBASIC3.91□□□□□ -1.78
LIM2P55344 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC3.91□□□□□ -1.78
LIM2P55344 AC025768.1-201ENST00000510057 267 ntBASIC3.91□□□□□ -1.78
LIM2P55344 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC3.91□□□□□ -1.78
LIM2P55344 HNRNPKP5-201ENST00000515300 253 ntBASIC3.91□□□□□ -1.78
LIM2P55344 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC3.91□□□□□ -1.78
LIM2P55344 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.91□□□□□ -1.78
LIM2P55344 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIM2P55344 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.91□□□□□ -1.78
LIM2P55344 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC3.91□□□□□ -1.78
LIM2P55344 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC3.91□□□□□ -1.78
LIM2P55344 RN7SL600P-201ENST00000581811 299 ntBASIC3.91□□□□□ -1.78
LIM2P55344 MIR548Y-201ENST00000582739 110 ntBASIC3.91□□□□□ -1.78
LIM2P55344 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIM2P55344 ELOCP28-201ENST00000590044 317 ntBASIC3.91□□□□□ -1.78
LIM2P55344 VN1R84P-201ENST00000593697 235 ntBASIC3.91□□□□□ -1.78
LIM2P55344 AC010200.2-201ENST00000605098 235 ntBASIC3.91□□□□□ -1.78
LIM2P55344 AC116447.1-201ENST00000613153 453 ntBASIC3.91□□□□□ -1.78
LIM2P55344 AC245389.2-201ENST00000616023 576 ntBASIC3.91□□□□□ -1.78
LIM2P55344 AC242843.1-201ENST00000618702 573 ntBASIC3.91□□□□□ -1.78
LIM2P55344 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.91□□□□□ -1.78
LIM2P55344 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC3.91□□□□□ -1.78
LIM2P55344 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIM2P55344 ERCC6-202ENST00000374127 1782 ntBASIC3.91□□□□□ -1.78
LIM2P55344 AC087190.4-201ENST00000574616 8334 ntBASIC3.91□□□□□ -1.78
LIM2P55344 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
LIM2P55344 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIM2P55344 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
LIM2P55344 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.91□□□□□ -1.78
LIM2P55344 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.91□□□□□ -1.78
LIM2P55344 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
LIM2P55344 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
LIM2P55344 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.9□□□□□ -1.78
LIM2P55344 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
LIM2P55344 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.79
LIM2P55344 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LIM2P55344 RN7SKP224-201ENST00000364140 325 ntBASIC3.9□□□□□ -1.79
LIM2P55344 RNU6-609P-201ENST00000365459 107 ntBASIC3.9□□□□□ -1.79
LIM2P55344 KRTAP19-8-201ENST00000382822 318 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LIM2P55344 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC3.9□□□□□ -1.79
LIM2P55344 AL049693.1-201ENST00000402760 611 ntBASIC3.9□□□□□ -1.79
LIM2P55344 RN7SKP33-201ENST00000410942 340 ntBASIC3.9□□□□□ -1.79
LIM2P55344 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.9□□□□□ -1.79
LIM2P55344 AL590609.2-201ENST00000421430 368 ntBASIC3.9□□□□□ -1.79
LIM2P55344 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.79
LIM2P55344 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.9□□□□□ -1.79
LIM2P55344 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC3.9□□□□□ -1.79
LIM2P55344 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.9□□□□□ -1.79
LIM2P55344 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LIM2P55344 AC005229.2-201ENST00000456995 399 ntBASIC3.9□□□□□ -1.79
LIM2P55344 RPL7P48-201ENST00000461513 746 ntBASIC3.9□□□□□ -1.79
LIM2P55344 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.9□□□□□ -1.79
LIM2P55344 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.9□□□□□ -1.79
LIM2P55344 RN7SL604P-201ENST00000492589 296 ntBASIC3.9□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms