Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.77□□□□□ -1.49
EPHB3P54753 CR383658.2-201ENST00000547576 1525 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 AC083837.1-201ENST00000565297 2994 ntBASIC5.77□□□□□ -1.49
EPHB3P54753 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
EPHB3P54753 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
EPHB3P54753 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
EPHB3P54753 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
EPHB3P54753 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.77□□□□□ -1.49
EPHB3P54753 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
EPHB3P54753 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.77□□□□□ -1.49
EPHB3P54753 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
EPHB3P54753 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
EPHB3P54753 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 AC109315.1-201ENST00000584143 1347 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 ZNF733P-202ENST00000444809 1573 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 AC006026.1-201ENST00000444025 1803 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.76□□□□□ -1.49
EPHB3P54753 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.76□□□□□ -1.49
EPHB3P54753 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.76□□□□□ -1.49
EPHB3P54753 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
EPHB3P54753 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 AC103591.2-201ENST00000265259 766 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 SPRR2D-201ENST00000360379 682 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 RNY4P14-201ENST00000363656 96 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
EPHB3P54753 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.76□□□□□ -1.49
EPHB3P54753 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
EPHB3P54753 ATP5HP3-201ENST00000396994 486 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 AL133388.1-201ENST00000404509 287 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.76□□□□□ -1.49
EPHB3P54753 BTF3L4P3-201ENST00000418879 476 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 SRSF1P1-201ENST00000424058 520 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 MTCO1P54-201ENST00000430139 712 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 AL450263.2-201ENST00000439400 589 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC5.76□□□□□ -1.49
EPHB3P54753 H3F3BP1-201ENST00000440551 403 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.76□□□□□ -1.49
EPHB3P54753 AL672138.1-201ENST00000450604 1015 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
EPHB3P54753 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC5.76□□□□□ -1.49
EPHB3P54753 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 CR383656.1-201ENST00000484916 377 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 RPS4XP15-201ENST00000489210 795 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC5.76□□□□□ -1.49
EPHB3P54753 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
EPHB3P54753 HMGN2P6-201ENST00000551091 273 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.76□□□□□ -1.49
EPHB3P54753 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 AC044798.1-201ENST00000565146 418 ntTSL 5 BASIC5.76□□□□□ -1.49
EPHB3P54753 AP005403.1-201ENST00000579720 229 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC5.76□□□□□ -1.49
EPHB3P54753 MIR548AB-201ENST00000584917 84 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 AC005261.5-201ENST00000596280 355 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.76□□□□□ -1.49
EPHB3P54753 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.76□□□□□ -1.49
EPHB3P54753 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC5.76□□□□□ -1.49
EPHB3P54753 RPL23AP61-201ENST00000623642 466 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
EPHB3P54753 AC024023.1-201ENST00000624530 922 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
EPHB3P54753 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC5.76□□□□□ -1.49
EPHB3P54753 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
EPHB3P54753 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.76□□□□□ -1.49
EPHB3P54753 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.76□□□□□ -1.49
EPHB3P54753 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
EPHB3P54753 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.76□□□□□ -1.49
EPHB3P54753 OR4F13P-202ENST00000560066 2054 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
EPHB3P54753 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 AC140479.2-201ENST00000421567 3130 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
EPHB3P54753 SEC63P2-201ENST00000503863 1939 ntBASIC5.76□□□□□ -1.49
EPHB3P54753 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.76□□□□□ -1.49
EPHB3P54753 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
EPHB3P54753 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC5.75□□□□□ -1.49
EPHB3P54753 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.75□□□□□ -1.49
EPHB3P54753 AC005225.5-201ENST00000623547 2225 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC5.75□□□□□ -1.49
EPHB3P54753 MTCO1P23-201ENST00000415223 1526 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 MAPK6PS3-201ENST00000403865 2162 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
EPHB3P54753 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.75□□□□□ -1.49
EPHB3P54753 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
EPHB3P54753 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
EPHB3P54753 SNORA16A-201ENST00000384342 137 ntBASIC5.75□□□□□ -1.49
EPHB3P54753 MIR142-201ENST00000384835 87 ntBASIC5.75□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms