Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC091979.2-201ENST00000607514 214 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 AL136370.1-201ENST00000608166 691 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 AL669942.2-201ENST00000620352 697 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC4.64□□□□□ -1.67
LIMK1P53667 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.64□□□□□ -1.67
LIMK1P53667 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC4.64□□□□□ -1.67
LIMK1P53667 AC106858.1-201ENST00000637497 429 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LIMK1P53667 AL596275.2-204ENST00000641628 552 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 AL596275.2-206ENST00000641957 626 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 DCAF13P3-201ENST00000561147 1334 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LIMK1P53667 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIMK1P53667 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LIMK1P53667 AC087190.4-201ENST00000574616 8334 ntBASIC4.64□□□□□ -1.67
LIMK1P53667 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.63□□□□□ -1.67
LIMK1P53667 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC4.63□□□□□ -1.67
LIMK1P53667 AC025031.4-201ENST00000621248 3271 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK1P53667 RNU1-13P-201ENST00000384499 162 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 MIR670-201ENST00000390142 98 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 LRRC37BP1-201ENST00000398851 714 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 AL357515.1-201ENST00000402967 542 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 PPIAP31-201ENST00000405422 495 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 E2F6P2-201ENST00000420708 748 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 OR4C10P-201ENST00000434991 931 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK1P53667 AC006994.1-201ENST00000438212 839 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC4.63□□□□□ -1.67
LIMK1P53667 ARL5AP2-201ENST00000444698 533 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK1P53667 AL358232.1-201ENST00000448030 501 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK1P53667 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.63□□□□□ -1.67
LIMK1P53667 AL035407.2-201ENST00000454090 378 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK1P53667 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC4.63□□□□□ -1.67
LIMK1P53667 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.63□□□□□ -1.67
LIMK1P53667 OR5H4P-201ENST00000510851 923 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC4.63□□□□□ -1.67
LIMK1P53667 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.63□□□□□ -1.67
LIMK1P53667 RN7SKP46-201ENST00000515942 234 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.63□□□□□ -1.67
LIMK1P53667 AP003730.1-201ENST00000524605 285 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 AP000916.1-201ENST00000533869 835 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC4.63□□□□□ -1.67
LIMK1P53667 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK1P53667 AC025035.1-201ENST00000551571 894 ntTSL 2 BASIC4.63□□□□□ -1.67
LIMK1P53667 PSMB7P1-201ENST00000556349 514 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 AC090618.1-201ENST00000571972 585 ntTSL 2 BASIC4.63□□□□□ -1.67
LIMK1P53667 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK1P53667 AC115085.1-201ENST00000588924 229 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 AC022916.3-201ENST00000592961 742 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.63□□□□□ -1.67
LIMK1P53667 AL353600.1-201ENST00000608148 251 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK1P53667 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK1P53667 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC4.63□□□□□ -1.67
LIMK1P53667 AL590396.2-201ENST00000636511 1041 ntBASIC4.63□□□□□ -1.67
LIMK1P53667 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK1P53667 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK1P53667 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK1P53667 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK1P53667 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LIMK1P53667 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.63□□□□□ -1.67
LIMK1P53667 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.63□□□□□ -1.67
LIMK1P53667 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
LIMK1P53667 AC008758.3-201ENST00000507003 1829 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK1P53667 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK1P53667 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK1P53667 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK1P53667 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.62□□□□□ -1.67
LIMK1P53667 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK1P53667 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK1P53667 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LIMK1P53667 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.62□□□□□ -1.67
LIMK1P53667 SNORD56.4-201ENST00000363883 71 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
LIMK1P53667 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
LIMK1P53667 RNU6-98P-201ENST00000384173 107 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 RPL23AP59-201ENST00000399415 461 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 RN7SKP202-201ENST00000410439 330 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 AC011933.1-201ENST00000413334 321 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 AC097467.3-223ENST00000417474 449 ntTSL 3 BASIC4.62□□□□□ -1.67
LIMK1P53667 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.62□□□□□ -1.67
LIMK1P53667 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC4.62□□□□□ -1.67
LIMK1P53667 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.62□□□□□ -1.67
LIMK1P53667 AL158053.1-201ENST00000441503 453 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.62□□□□□ -1.67
LIMK1P53667 AC133473.1-201ENST00000455173 299 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 AC116533.1-201ENST00000459748 321 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC4.62□□□□□ -1.67
LIMK1P53667 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC4.62□□□□□ -1.67
LIMK1P53667 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 RPL30P11-201ENST00000495304 339 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 MTND4LP2-201ENST00000502312 285 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 NAMPTP2-201ENST00000505629 1115 ntBASIC4.62□□□□□ -1.67
LIMK1P53667 AC091868.1-201ENST00000508746 304 ntBASIC4.62□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms