Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RPL7P24-201ENST00000493052 752 ntBASIC4.35□□□□□ -1.71
CASP4P49662 AC139783.2-201ENST00000504847 1145 ntBASIC4.35□□□□□ -1.71
CASP4P49662 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.35□□□□□ -1.71
CASP4P49662 HNRNPKP5-201ENST00000515300 253 ntBASIC4.35□□□□□ -1.71
CASP4P49662 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.35□□□□□ -1.71
CASP4P49662 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC4.35□□□□□ -1.71
CASP4P49662 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CASP4P49662 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.35□□□□□ -1.71
CASP4P49662 AC068714.1-201ENST00000559623 800 ntBASIC4.35□□□□□ -1.71
CASP4P49662 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.35□□□□□ -1.71
CASP4P49662 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC4.35□□□□□ -1.71
CASP4P49662 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.35□□□□□ -1.71
CASP4P49662 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.35□□□□□ -1.71
CASP4P49662 AC123786.2-201ENST00000603459 275 ntBASIC4.35□□□□□ -1.71
CASP4P49662 RNU4-89P-201ENST00000607443 133 ntBASIC4.35□□□□□ -1.71
CASP4P49662 AC023043.4-201ENST00000612081 449 ntBASIC4.35□□□□□ -1.71
CASP4P49662 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.35□□□□□ -1.71
CASP4P49662 AC233309.1-201ENST00000619522 751 ntBASIC4.35□□□□□ -1.71
CASP4P49662 AC124312.6-202ENST00000623624 418 ntBASIC4.35□□□□□ -1.71
CASP4P49662 AC112484.5-201ENST00000624189 228 ntBASIC4.35□□□□□ -1.71
CASP4P49662 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CASP4P49662 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.35□□□□□ -1.71
CASP4P49662 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.35□□□□□ -1.71
CASP4P49662 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC4.35□□□□□ -1.71
CASP4P49662 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
CASP4P49662 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
CASP4P49662 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CASP4P49662 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
CASP4P49662 SPRR2C-201ENST00000290702 219 ntBASIC4.34□□□□□ -1.71
CASP4P49662 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
CASP4P49662 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.34□□□□□ -1.71
CASP4P49662 AC004975.1-201ENST00000428733 208 ntBASIC4.34□□□□□ -1.71
CASP4P49662 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.34□□□□□ -1.71
CASP4P49662 MTCO3P21-201ENST00000430791 643 ntBASIC4.34□□□□□ -1.71
CASP4P49662 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.34□□□□□ -1.71
CASP4P49662 RNU6-775P-201ENST00000459318 96 ntBASIC4.34□□□□□ -1.71
CASP4P49662 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.34□□□□□ -1.71
CASP4P49662 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.34□□□□□ -1.71
CASP4P49662 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC4.34□□□□□ -1.71
CASP4P49662 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.34□□□□□ -1.71
CASP4P49662 AC108471.1-201ENST00000513977 287 ntBASIC4.34□□□□□ -1.71
CASP4P49662 AC016550.3-201ENST00000515706 767 ntBASIC4.34□□□□□ -1.71
CASP4P49662 MYL12AP1-201ENST00000518490 515 ntBASIC4.34□□□□□ -1.71
CASP4P49662 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.34□□□□□ -1.71
CASP4P49662 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.34□□□□□ -1.71
CASP4P49662 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.34□□□□□ -1.71
CASP4P49662 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC4.34□□□□□ -1.71
CASP4P49662 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
CASP4P49662 YPEL5P3-201ENST00000547227 352 ntBASIC4.34□□□□□ -1.71
CASP4P49662 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC4.34□□□□□ -1.71
CASP4P49662 AC135803.1-201ENST00000608748 565 ntBASIC4.34□□□□□ -1.71
CASP4P49662 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CASP4P49662 RNA5SP196-201ENST00000625967 102 ntBASIC4.34□□□□□ -1.71
CASP4P49662 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.71
CASP4P49662 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
CASP4P49662 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
CASP4P49662 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.34□□□□□ -1.71
CASP4P49662 CASC19-261ENST00000641853 1638 ntBASIC4.34□□□□□ -1.71
CASP4P49662 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.34□□□□□ -1.71
CASP4P49662 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
CASP4P49662 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.34□□□□□ -1.72
CASP4P49662 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.33□□□□□ -1.72
CASP4P49662 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC4.33□□□□□ -1.72
CASP4P49662 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CASP4P49662 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC4.33□□□□□ -1.72
CASP4P49662 RNU6-304P-201ENST00000364855 107 ntBASIC4.33□□□□□ -1.72
CASP4P49662 RNU6-152P-201ENST00000384037 107 ntBASIC4.33□□□□□ -1.72
CASP4P49662 MIR320B1-201ENST00000390209 79 ntBASIC4.33□□□□□ -1.72
CASP4P49662 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CASP4P49662 LSM5-205ENST00000409952 687 ntTSL 4 BASIC4.33□□□□□ -1.72
CASP4P49662 LSM5-206ENST00000409987 504 ntTSL 5 BASIC4.33□□□□□ -1.72
CASP4P49662 RNA5SP104-201ENST00000410989 118 ntBASIC4.33□□□□□ -1.72
CASP4P49662 RNA5SP39-201ENST00000411245 120 ntBASIC4.33□□□□□ -1.72
CASP4P49662 ZNF92P1Y-201ENST00000415010 1191 ntBASIC4.33□□□□□ -1.72
CASP4P49662 TRGV6-201ENST00000417928 299 ntBASIC4.33□□□□□ -1.72
CASP4P49662 AC004552.1-201ENST00000419089 348 ntBASIC4.33□□□□□ -1.72
CASP4P49662 AL691449.1-201ENST00000426570 421 ntBASIC4.33□□□□□ -1.72
CASP4P49662 RPS27AP12-201ENST00000429552 465 ntBASIC4.33□□□□□ -1.72
CASP4P49662 AL117339.2-201ENST00000430475 180 ntBASIC4.33□□□□□ -1.72
CASP4P49662 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.33□□□□□ -1.72
CASP4P49662 AC092013.1-201ENST00000438795 332 ntBASIC4.33□□□□□ -1.72
CASP4P49662 AC083863.1-201ENST00000438811 231 ntBASIC4.33□□□□□ -1.72
CASP4P49662 AC006326.1-201ENST00000445465 787 ntBASIC4.33□□□□□ -1.72
CASP4P49662 HMGB3P22-202ENST00000451823 572 ntBASIC4.33□□□□□ -1.72
CASP4P49662 RPS26P3-201ENST00000470205 348 ntBASIC4.33□□□□□ -1.72
CASP4P49662 METTL15P1-201ENST00000481421 1045 ntBASIC4.33□□□□□ -1.72
CASP4P49662 AC090543.2-201ENST00000483963 348 ntBASIC4.33□□□□□ -1.72
CASP4P49662 AC004057.1-201ENST00000485827 348 ntBASIC4.33□□□□□ -1.72
CASP4P49662 RN7SL271P-201ENST00000487601 295 ntBASIC4.33□□□□□ -1.72
CASP4P49662 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.33□□□□□ -1.72
CASP4P49662 AC025445.1-201ENST00000502728 300 ntBASIC4.33□□□□□ -1.72
CASP4P49662 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CASP4P49662 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.33□□□□□ -1.72
CASP4P49662 FABP5P6-201ENST00000510588 409 ntBASIC4.33□□□□□ -1.72
CASP4P49662 AC092593.2-201ENST00000513866 913 ntBASIC4.33□□□□□ -1.72
CASP4P49662 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.33□□□□□ -1.72
CASP4P49662 AC136624.4-201ENST00000573044 370 ntBASIC4.33□□□□□ -1.72
CASP4P49662 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
CASP4P49662 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.33□□□□□ -1.72
CASP4P49662 AC091167.4-201ENST00000605079 184 ntBASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms