Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CR1P49238 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CX3CR1P49238 U3.15-201ENST00000365398 212 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 CYB5AP4-201ENST00000396692 399 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CX3CR1P49238 AP000357.1-201ENST00000409926 1165 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 RN7SKP235-201ENST00000410662 305 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CR1P49238 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC3.68□□□□□ -1.82
CX3CR1P49238 P2RY10P2-201ENST00000416730 913 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 AC234782.4-201ENST00000417646 1048 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CR1P49238 MTCO3P4-201ENST00000419236 787 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 AL138878.2-201ENST00000440581 1241 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC3.68□□□□□ -1.82
CX3CR1P49238 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.68□□□□□ -1.82
CX3CR1P49238 AL645939.1-201ENST00000453429 797 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 RAD23BP3-201ENST00000454157 1152 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 RPL37P3-201ENST00000456825 293 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 RPL23AP71-201ENST00000470966 469 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.68□□□□□ -1.82
CX3CR1P49238 AC231760.1-201ENST00000498002 260 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 HMGB1P21-201ENST00000502313 581 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 AL592156.1-201ENST00000508758 304 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 RNU4ATAC6P-201ENST00000516592 126 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 RNA5SP73-201ENST00000516744 108 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 OR8G5-201ENST00000524943 1041 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.68□□□□□ -1.82
CX3CR1P49238 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.68□□□□□ -1.82
CX3CR1P49238 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC3.68□□□□□ -1.82
CX3CR1P49238 POLR2KP1-201ENST00000553226 168 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CR1P49238 AL360157.1-201ENST00000565962 87 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 AP001180.3-201ENST00000582221 145 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 MIR4715-201ENST00000584117 79 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CR1P49238 AC079791.1-201ENST00000605356 973 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CX3CR1P49238 CR589904.2-201ENST00000612533 440 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 AC016911.1-201ENST00000613297 452 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 AC026368.1-201ENST00000614934 690 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 MIR6730-201ENST00000622213 67 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 AL158163.1-201ENST00000603915 1649 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CR1P49238 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.68□□□□□ -1.82
CX3CR1P49238 AC138393.1-206ENST00000540997 1886 ntBASIC3.68□□□□□ -1.82
CX3CR1P49238 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
CX3CR1P49238 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CX3CR1P49238 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CR1P49238 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.68□□□□□ -1.82
CX3CR1P49238 RNU1-14P-201ENST00000362759 152 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC3.67□□□□□ -1.82
CX3CR1P49238 RNU6-40P-201ENST00000384254 107 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 MIR192-201ENST00000384915 110 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 RN7SKP56-201ENST00000410513 331 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 NRBF2P2-201ENST00000413087 861 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 FO393419.3-201ENST00000428741 282 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 CNOT7P1-201ENST00000429006 852 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 RPS3AP54-201ENST00000435535 734 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 RPL23AP46-201ENST00000438548 490 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 HMGB3P22-202ENST00000451823 572 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 Z95152.1-201ENST00000453556 656 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 NDUFA12P1-201ENST00000455914 406 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 RPL23AP24-201ENST00000458203 385 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.67□□□□□ -1.82
CX3CR1P49238 HMGB3P14-201ENST00000494195 599 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 SSR3-208ENST00000496050 579 ntTSL 4 BASIC3.67□□□□□ -1.82
CX3CR1P49238 AC146944.2-203ENST00000502493 354 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 AC111193.1-201ENST00000504097 155 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 AC139495.1-202ENST00000513164 354 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 RNA5SP519-201ENST00000516480 119 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CX3CR1P49238 AC010476.1-201ENST00000519111 851 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 HAUS1P3-201ENST00000523909 662 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 AC137768.1-201ENST00000549998 553 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.67□□□□□ -1.82
CX3CR1P49238 AC067805.1-201ENST00000559344 470 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 MTATP6P25-201ENST00000574491 261 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 AC020914.4-201ENST00000597690 277 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.67□□□□□ -1.82
CX3CR1P49238 AC083899.3-201ENST00000603413 594 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 HMGB1P50-201ENST00000605814 607 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 AC019193.2-201ENST00000610012 634 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC3.67□□□□□ -1.82
CX3CR1P49238 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.67□□□□□ -1.82
CX3CR1P49238 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CX3CR1P49238 MAPK10-373ENST00000641983 6772 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 AC134882.1-201ENST00000603738 1676 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 MFSD8-216ENST00000641147 4009 ntBASIC3.67□□□□□ -1.82
CX3CR1P49238 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CX3CR1P49238 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CX3CR1P49238 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CX3CR1P49238 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.66□□□□□ -1.82
CX3CR1P49238 AC083899.2-201ENST00000423285 1376 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CR1P49238 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CR1P49238 AC103591.2-201ENST00000265259 766 ntBASIC3.66□□□□□ -1.82
CX3CR1P49238 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CX3CR1P49238 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms