Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM23P36406 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM23P36406 AC084757.1-201ENST00000559987 490 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 AC027455.1-201ENST00000574104 594 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 AC069366.1-201ENST00000583159 838 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 VN1R79P-201ENST00000593540 513 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM23P36406 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM23P36406 AC055764.2-201ENST00000610089 670 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM23P36406 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM23P36406 AC007546.2-201ENST00000623996 360 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM23P36406 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM23P36406 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM23P36406 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM23P36406 EOGT-210ENST00000615922 1931 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 MARK2P15-201ENST00000432204 2186 ntBASIC4.3□□□□□ -1.72
TRIM23P36406 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM23P36406 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM23P36406 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM23P36406 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM23P36406 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM23P36406 NLGN1-201ENST00000361589 5092 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM23P36406 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
TRIM23P36406 RNA5SP175-201ENST00000364275 119 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM23P36406 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM23P36406 MIR195-201ENST00000385194 87 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 AC097374.1-203ENST00000400783 485 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 RNA5SP104-201ENST00000410989 118 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 NRBF2P2-201ENST00000413087 861 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM23P36406 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.29□□□□□ -1.72
TRIM23P36406 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM23P36406 AC073508.1-201ENST00000428866 656 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 SKP1P3-201ENST00000429280 487 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM23P36406 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM23P36406 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM23P36406 AC239809.1-201ENST00000450470 217 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 RPL35AP15-201ENST00000468042 339 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 NPM1P17-201ENST00000479221 602 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM23P36406 AC010374.1-201ENST00000503762 1237 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 AL592156.1-201ENST00000508758 304 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM23P36406 RNA5SP73-201ENST00000516744 108 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
TRIM23P36406 MIR100HG-221ENST00000534297 572 ntTSL 4 BASIC4.29□□□□□ -1.72
TRIM23P36406 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM23P36406 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM23P36406 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM23P36406 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM23P36406 AC025884.1-201ENST00000556034 378 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM23P36406 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM23P36406 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM23P36406 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.29□□□□□ -1.72
TRIM23P36406 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM23P36406 FAM27D1-201ENST00000612308 341 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.29□□□□□ -1.72
TRIM23P36406 AC090617.9-201ENST00000623751 147 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 AC015726.3-201ENST00000624501 418 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 AC097372.4-201ENST00000625025 466 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 AC055839.1-201ENST00000634467 498 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 FP325313.1-201ENST00000638228 703 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 AC009452.1-201ENST00000640823 606 ntBASIC4.29□□□□□ -1.72
TRIM23P36406 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM23P36406 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM23P36406 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
TRIM23P36406 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM23P36406 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.29□□□□□ -1.72
TRIM23P36406 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
TRIM23P36406 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.29□□□□□ -1.72
TRIM23P36406 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TRIM23P36406 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM23P36406 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM23P36406 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM23P36406 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TRIM23P36406 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM23P36406 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TRIM23P36406 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM23P36406 RNU1-44P-201ENST00000384453 163 ntBASIC4.28□□□□□ -1.72
TRIM23P36406 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TRIM23P36406 AL353692.2-201ENST00000407054 335 ntBASIC4.28□□□□□ -1.72
TRIM23P36406 RN7SKP177-201ENST00000410567 355 ntBASIC4.28□□□□□ -1.72
TRIM23P36406 AC019070.1-201ENST00000415008 1024 ntBASIC4.28□□□□□ -1.72
TRIM23P36406 AL357078.2-201ENST00000416486 427 ntBASIC4.28□□□□□ -1.72
TRIM23P36406 RPS24P8-201ENST00000431490 402 ntBASIC4.28□□□□□ -1.72
TRIM23P36406 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TRIM23P36406 TRAPPC13P1-201ENST00000435991 1062 ntBASIC4.28□□□□□ -1.72
TRIM23P36406 AL031663.1-201ENST00000437445 219 ntBASIC4.28□□□□□ -1.72
TRIM23P36406 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.28□□□□□ -1.72
TRIM23P36406 RPL23AP81-201ENST00000455252 467 ntBASIC4.28□□□□□ -1.72
TRIM23P36406 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC4.28□□□□□ -1.72
TRIM23P36406 AC068587.1-201ENST00000483613 781 ntBASIC4.28□□□□□ -1.72
TRIM23P36406 AC090013.1-201ENST00000485147 480 ntBASIC4.28□□□□□ -1.72
TRIM23P36406 AC108475.1-201ENST00000507880 950 ntBASIC4.28□□□□□ -1.72
TRIM23P36406 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms