Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC4.76□□□□□ -1.65
HOXC13P31276 AC069304.3-201ENST00000603938 1084 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AC005191.1-201ENST00000603950 358 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AC068313.1-201ENST00000604028 1008 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AC115286.1-201ENST00000604298 434 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 RNA5SP108-201ENST00000605921 117 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AL353600.1-201ENST00000608148 251 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AC024941.1-201ENST00000612250 334 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AC022106.2-201ENST00000620114 757 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AL590396.2-201ENST00000636511 1041 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 OR56B2P-202ENST00000641377 2453 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AL596275.2-204ENST00000641628 552 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AL596275.2-206ENST00000641957 626 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AC107068.1-201ENST00000563286 4218 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.76□□□□□ -1.65
HOXC13P31276 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.76□□□□□ -1.65
HOXC13P31276 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HOXC13P31276 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HOXC13P31276 AL512283.1-201ENST00000606756 1384 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 AL136164.3-201ENST00000624429 3978 ntBASIC4.76□□□□□ -1.65
HOXC13P31276 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
HOXC13P31276 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC13P31276 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC13P31276 AC021146.4-201ENST00000309229 279 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC13P31276 UBBP2-201ENST00000376781 231 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC13P31276 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXC13P31276 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC13P31276 AC023128.2-201ENST00000420880 1223 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.75□□□□□ -1.65
HOXC13P31276 PNRC2P1-201ENST00000423940 420 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC13P31276 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC13P31276 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC13P31276 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC13P31276 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC13P31276 SNRPGP5-201ENST00000456003 220 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 RPL23AP24-201ENST00000458203 385 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 RPL21P71-201ENST00000465598 459 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 AC022795.1-201ENST00000473808 480 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 CAB39P1-201ENST00000502277 460 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 AC098799.3-201ENST00000506095 438 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC13P31276 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC13P31276 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC13P31276 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXC13P31276 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC4.75□□□□□ -1.65
HOXC13P31276 AC023762.1-201ENST00000603280 584 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 AC092653.1-201ENST00000608509 531 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 LINC02335-201ENST00000616578 659 ntTSL 3 BASIC4.75□□□□□ -1.65
HOXC13P31276 ZYXP1-201ENST00000617638 118 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 C2orf27A-204ENST00000623058 969 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 ATE1-AS1-202ENST00000636460 506 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 NSRP1P1-201ENST00000444067 1693 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 LUZP2-207ENST00000533227 5016 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC13P31276 ASNSP1-204ENST00000641977 1664 ntBASIC4.75□□□□□ -1.65
HOXC13P31276 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC13P31276 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC13P31276 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HOXC13P31276 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC13P31276 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HOXC13P31276 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC4.75□□□□□ -1.65
HOXC13P31276 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC13P31276 AL031595.2-201ENST00000624215 19071 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC13P31276 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC13P31276 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC13P31276 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
HOXC13P31276 AL355852.1-201ENST00000454081 1771 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXC13P31276 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.74□□□□□ -1.65
HOXC13P31276 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
HOXC13P31276 Y_RNA.110-201ENST00000363220 99 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 SNORA71.2-201ENST00000364941 134 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 RNU6-356P-201ENST00000384140 107 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 RNU6-98P-201ENST00000384173 107 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 RPL23AP48-201ENST00000406913 488 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 RN7SKP177-201ENST00000410567 355 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 RN7SKP263-201ENST00000411194 309 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 AC004448.2-201ENST00000422360 586 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 AL389915.1-201ENST00000422463 466 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 AC092832.1-201ENST00000422934 400 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 AC005189.1-201ENST00000431286 310 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 RPL34P6-201ENST00000432390 345 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXC13P31276 NUTF2P3-201ENST00000448540 384 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXC13P31276 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
HOXC13P31276 AC104763.1-201ENST00000475274 360 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.74□□□□□ -1.65
HOXC13P31276 SNX5P1-201ENST00000505757 1041 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 RN7SKP46-201ENST00000515942 234 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 HMGB1P23-201ENST00000518743 568 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXC13P31276 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC4.74□□□□□ -1.65
HOXC13P31276 AL158211.1-201ENST00000566763 763 ntBASIC4.74□□□□□ -1.65
HOXC13P31276 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms