Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 RPL23AP72-201ENST00000492447 435 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CNGA1P29973 KRT19P6-201ENST00000510983 209 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC5.89□□□□□ -1.47
CNGA1P29973 RPL7L1P13-201ENST00000511702 739 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 RNU6-488P-201ENST00000515918 99 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.89□□□□□ -1.47
CNGA1P29973 AP001189.2-201ENST00000527320 189 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC5.89□□□□□ -1.47
CNGA1P29973 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.89□□□□□ -1.47
CNGA1P29973 AC068993.1-201ENST00000546724 589 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 SERPINE4P-201ENST00000554978 281 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.89□□□□□ -1.47
CNGA1P29973 AC110743.1-201ENST00000584870 478 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC5.89□□□□□ -1.47
CNGA1P29973 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
CNGA1P29973 AL109653.1-201ENST00000603091 248 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 VIS1.1-201ENST00000610517 203 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 AC244107.2-201ENST00000611773 76 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 MIR3974-201ENST00000637126 96 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNGA1P29973 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
CNGA1P29973 ZNF736P9Y-201ENST00000439586 1345 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
CNGA1P29973 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.89□□□□□ -1.47
CNGA1P29973 AC011447.7-201ENST00000624228 1590 ntBASIC5.89□□□□□ -1.47
CNGA1P29973 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CNGA1P29973 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CNGA1P29973 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CNGA1P29973 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CNGA1P29973 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.88□□□□□ -1.47
CNGA1P29973 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CNGA1P29973 RNU6-115P-201ENST00000364310 107 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 SNORA62-201ENST00000365493 153 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CNGA1P29973 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CNGA1P29973 MIR1182-201ENST00000408363 97 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AC011233.1-201ENST00000422812 283 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AL031736.2-201ENST00000426573 787 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AC092920.1-201ENST00000428516 678 ntTSL 5 BASIC5.88□□□□□ -1.47
CNGA1P29973 AL050321.1-201ENST00000432363 400 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC5.88□□□□□ -1.47
CNGA1P29973 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.88□□□□□ -1.47
CNGA1P29973 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.88□□□□□ -1.47
CNGA1P29973 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC5.88□□□□□ -1.47
CNGA1P29973 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC5.88□□□□□ -1.47
CNGA1P29973 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
CNGA1P29973 AL109741.2-201ENST00000455561 343 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AC063943.1-201ENST00000465434 453 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC5.88□□□□□ -1.47
CNGA1P29973 RN7SL385P-201ENST00000468873 276 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC5.88□□□□□ -1.47
CNGA1P29973 AP000797.2-201ENST00000475768 606 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AC023424.1-201ENST00000496058 459 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.88□□□□□ -1.47
CNGA1P29973 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC5.88□□□□□ -1.47
CNGA1P29973 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.88□□□□□ -1.47
CNGA1P29973 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.88□□□□□ -1.47
CNGA1P29973 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC5.88□□□□□ -1.47
CNGA1P29973 RN7SKP96-201ENST00000516948 297 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.88□□□□□ -1.47
CNGA1P29973 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC5.88□□□□□ -1.47
CNGA1P29973 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.88□□□□□ -1.47
CNGA1P29973 RGS5-219ENST00000528019 512 ntTSL 4 BASIC5.88□□□□□ -1.47
CNGA1P29973 OR5M2P-201ENST00000529003 936 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 LSM3P2-201ENST00000551246 273 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC5.88□□□□□ -1.47
CNGA1P29973 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.88□□□□□ -1.47
CNGA1P29973 AC093519.1-201ENST00000566109 298 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AC209154.1-201ENST00000582156 337 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.88□□□□□ -1.47
CNGA1P29973 MIR7853-201ENST00000584820 132 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC5.88□□□□□ -1.47
CNGA1P29973 AL592221.1-201ENST00000605266 382 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 Z95327.3-201ENST00000610385 572 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
CNGA1P29973 AL627230.1-201ENST00000613077 211 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AL139418.1-201ENST00000613613 177 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AL591926.8-201ENST00000616876 211 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AC069209.1-201ENST00000619282 651 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AL603755.1-201ENST00000619504 163 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AP003400.3-201ENST00000624904 346 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
CNGA1P29973 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.88□□□□□ -1.47
CNGA1P29973 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CNGA1P29973 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CNGA1P29973 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.88□□□□□ -1.47
CNGA1P29973 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
CNGA1P29973 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC5.88□□□□□ -1.47
CNGA1P29973 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.88□□□□□ -1.47
CNGA1P29973 AC026951.1-201ENST00000559530 2459 ntBASIC5.88□□□□□ -1.47
CNGA1P29973 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CNGA1P29973 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.88□□□□□ -1.47
CNGA1P29973 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.88□□□□□ -1.47
CNGA1P29973 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
CNGA1P29973 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CNGA1P29973 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CNGA1P29973 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CNGA1P29973 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.87□□□□□ -1.47
CNGA1P29973 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms