Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC092685.1-201ENST00000447960 1243 ntBASIC4.35□□□□□ -1.71
PTPN4P29074 MTND2P25-201ENST00000449028 610 ntBASIC4.35□□□□□ -1.71
PTPN4P29074 ABCF2P2-201ENST00000450549 296 ntBASIC4.35□□□□□ -1.71
PTPN4P29074 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN4P29074 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
PTPN4P29074 RN7SL585P-201ENST00000470538 280 ntBASIC4.35□□□□□ -1.71
PTPN4P29074 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN4P29074 AC025674.1-201ENST00000507074 324 ntBASIC4.35□□□□□ -1.71
PTPN4P29074 SETP12-201ENST00000514068 805 ntBASIC4.35□□□□□ -1.71
PTPN4P29074 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN4P29074 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN4P29074 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN4P29074 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.35□□□□□ -1.71
PTPN4P29074 AC068831.4-201ENST00000556118 109 ntBASIC4.35□□□□□ -1.71
PTPN4P29074 AL109741.3-201ENST00000561748 592 ntBASIC4.35□□□□□ -1.71
PTPN4P29074 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN4P29074 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC4.35□□□□□ -1.71
PTPN4P29074 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC4.35□□□□□ -1.71
PTPN4P29074 OR4H6P-202ENST00000603819 340 ntBASIC4.35□□□□□ -1.71
PTPN4P29074 AC092653.1-201ENST00000608509 531 ntBASIC4.35□□□□□ -1.71
PTPN4P29074 AC026368.1-201ENST00000614934 690 ntBASIC4.35□□□□□ -1.71
PTPN4P29074 AP003072.4-201ENST00000624580 310 ntBASIC4.35□□□□□ -1.71
PTPN4P29074 HPVC1-201ENST00000629899 1198 ntBASIC4.35□□□□□ -1.71
PTPN4P29074 ZNF962P-201ENST00000443465 3140 ntBASIC4.35□□□□□ -1.71
PTPN4P29074 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN4P29074 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN4P29074 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
PTPN4P29074 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.35□□□□□ -1.71
PTPN4P29074 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
PTPN4P29074 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN4P29074 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PTPN4P29074 AC007529.1-201ENST00000418574 2178 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN4P29074 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
PTPN4P29074 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN4P29074 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN4P29074 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC4.34□□□□□ -1.71
PTPN4P29074 RN7SKP227-201ENST00000364445 330 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 RNA5SP509-201ENST00000364577 119 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN4P29074 RNU6-1279P-201ENST00000383917 103 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 SDHCP2-201ENST00000398565 501 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN4P29074 ZNF603P-201ENST00000405613 487 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 AL356387.2-201ENST00000422272 243 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.34□□□□□ -1.71
PTPN4P29074 RPL30P3-201ENST00000424262 333 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
PTPN4P29074 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN4P29074 MED6P1-201ENST00000439659 713 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 HMGB1P5-202ENST00000451497 985 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN4P29074 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN4P29074 RPL23AP24-201ENST00000458203 385 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 RPL23AP71-201ENST00000470966 469 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 CREM-230ENST00000474931 626 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN4P29074 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN4P29074 AC107398.1-201ENST00000486904 505 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 AC111193.1-201ENST00000504097 155 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN4P29074 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN4P29074 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN4P29074 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN4P29074 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN4P29074 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.34□□□□□ -1.71
PTPN4P29074 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
PTPN4P29074 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN4P29074 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN4P29074 CKS1BP1-201ENST00000555221 240 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN4P29074 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN4P29074 AL360157.1-201ENST00000565962 87 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC4.34□□□□□ -1.71
PTPN4P29074 KPNA2P3-201ENST00000584190 848 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN4P29074 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN4P29074 BPIFA4P-203ENST00000603168 689 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 ABI1P1-201ENST00000603375 1120 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 AC020910.2-201ENST00000603635 610 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 AL160290.3-201ENST00000604869 165 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 Z98200.1-201ENST00000607298 470 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.34□□□□□ -1.71
PTPN4P29074 AC012409.3-201ENST00000611343 981 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 MIR6716-201ENST00000613413 80 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 AL645927.2-201ENST00000618350 349 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 AL121890.3-201ENST00000618494 516 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 AC019278.1-201ENST00000623516 479 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 AP000843.1-201ENST00000624880 701 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 OR52H1-202ENST00000641796 1061 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
PTPN4P29074 AC017007.4-201ENST00000503353 1352 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC4.34□□□□□ -1.71
PTPN4P29074 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPN4P29074 USP9YP4-201ENST00000424401 1745 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 SAGE2P-201ENST00000420011 2126 ntBASIC4.34□□□□□ -1.71
PTPN4P29074 AL139811.1-201ENST00000424779 2299 ntBASIC4.34□□□□□ -1.72
PTPN4P29074 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.34□□□□□ -1.72
PTPN4P29074 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
PTPN4P29074 AC025031.4-201ENST00000621248 3271 ntBASIC4.34□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms