Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 AC093838.1-201ENST00000613014 469 ntBASIC5.63□□□□□ -1.51
VAMP1P23763 AC002553.4-201ENST00000616896 331 ntBASIC5.63□□□□□ -1.51
VAMP1P23763 AL136313.1-201ENST00000624804 202 ntBASIC5.63□□□□□ -1.51
VAMP1P23763 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VAMP1P23763 GUCY1B2-204ENST00000531898 1979 ntBASIC5.63□□□□□ -1.51
VAMP1P23763 EEF1A1P36-201ENST00000427807 1351 ntBASIC5.63□□□□□ -1.51
VAMP1P23763 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.63□□□□□ -1.51
VAMP1P23763 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.63□□□□□ -1.51
VAMP1P23763 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.63□□□□□ -1.51
VAMP1P23763 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
VAMP1P23763 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
VAMP1P23763 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC5.63□□□□□ -1.51
VAMP1P23763 FHL5-203ENST00000541107 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 NT5C2-201ENST00000343289 3435 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 IFT43-201ENST00000238628 816 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 SNORD8-201ENST00000363915 110 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
VAMP1P23763 RNA5SP297-201ENST00000391029 113 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 MSRB1P1-201ENST00000396851 354 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 RNA5SP251-201ENST00000410614 137 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 RNA5SP107-201ENST00000411358 122 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 AC116036.1-201ENST00000412199 367 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 AL591368.1-202ENST00000413050 548 ntTSL 3 BASIC5.62□□□□□ -1.51
VAMP1P23763 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC5.62□□□□□ -1.51
VAMP1P23763 RPL35AP24-201ENST00000413846 330 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 AL451164.1-201ENST00000417149 390 ntTSL 3 BASIC5.62□□□□□ -1.51
VAMP1P23763 RPS17P17-201ENST00000419392 409 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC5.62□□□□□ -1.51
VAMP1P23763 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC5.62□□□□□ -1.51
VAMP1P23763 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC5.62□□□□□ -1.51
VAMP1P23763 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC5.62□□□□□ -1.51
VAMP1P23763 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC5.62□□□□□ -1.51
VAMP1P23763 AL161626.1-201ENST00000441480 490 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 HMGB3P9-201ENST00000441799 583 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC5.62□□□□□ -1.51
VAMP1P23763 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC5.62□□□□□ -1.51
VAMP1P23763 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 RPS15AP36-201ENST00000492022 382 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 RN7SL306P-201ENST00000492941 296 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 AC114781.3-201ENST00000512083 142 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.62□□□□□ -1.51
VAMP1P23763 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC5.62□□□□□ -1.51
VAMP1P23763 RN7SKP67-201ENST00000515905 235 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 FTH1P11-201ENST00000517577 551 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.62□□□□□ -1.51
VAMP1P23763 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC5.62□□□□□ -1.51
VAMP1P23763 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.62□□□□□ -1.51
VAMP1P23763 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.62□□□□□ -1.51
VAMP1P23763 AC087277.1-201ENST00000529910 535 ntTSL 3 BASIC5.62□□□□□ -1.51
VAMP1P23763 AC084880.4-201ENST00000538405 577 ntTSL 2 BASIC5.62□□□□□ -1.51
VAMP1P23763 AC087257.2-201ENST00000538759 928 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 AL121603.1-201ENST00000553815 142 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC5.62□□□□□ -1.51
VAMP1P23763 MIR3689F-201ENST00000579617 66 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.62□□□□□ -1.51
VAMP1P23763 AL031666.3-201ENST00000609320 1006 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 AC093788.1-201ENST00000609356 927 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 BX323046.1-201ENST00000610145 535 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 MIR6872-201ENST00000612981 62 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC5.62□□□□□ -1.51
VAMP1P23763 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC5.62□□□□□ -1.51
VAMP1P23763 AC027559.1-201ENST00000636288 271 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC5.62□□□□□ -1.51
VAMP1P23763 EEF1A1P24-201ENST00000451469 1378 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 AC138915.3-201ENST00000562908 1389 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.62□□□□□ -1.51
VAMP1P23763 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 AC140134.1-201ENST00000511830 3544 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 OSBPL9P4-201ENST00000371707 1800 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
VAMP1P23763 AC004656.1-201ENST00000568479 4951 ntBASIC5.62□□□□□ -1.51
VAMP1P23763 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP1P23763 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP1P23763 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.61□□□□□ -1.51
VAMP1P23763 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP1P23763 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
VAMP1P23763 CD96-202ENST00000352690 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP1P23763 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.61□□□□□ -1.51
VAMP1P23763 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
VAMP1P23763 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.61□□□□□ -1.51
VAMP1P23763 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP1P23763 Y_RNA.89-201ENST00000363031 102 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 RNU6-867P-201ENST00000364956 107 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP1P23763 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.61□□□□□ -1.51
VAMP1P23763 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VAMP1P23763 CST13P-201ENST00000376992 428 ntBASIC5.61□□□□□ -1.51
VAMP1P23763 MIR152-201ENST00000385212 87 ntBASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.2 ms