Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RN7SKP56-201ENST00000410513 331 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 RPL21P32-201ENST00000419877 477 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 OFD1P18Y-201ENST00000420889 959 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC6.63□□□□□ -1.35
ERCC3P19447 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC6.63□□□□□ -1.35
ERCC3P19447 AL450996.1-201ENST00000445574 1202 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC6.63□□□□□ -1.35
ERCC3P19447 AL592447.1-201ENST00000447592 540 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.63□□□□□ -1.35
ERCC3P19447 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC3P19447 AC109780.1-201ENST00000451768 1344 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC3P19447 SBDSP1-204ENST00000453858 737 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 AC091564.1-201ENST00000464563 479 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 RN7SL809P-201ENST00000482040 297 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 RPL38P3-201ENST00000484463 213 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 AL035690.1-201ENST00000490892 383 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.63□□□□□ -1.35
ERCC3P19447 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.63□□□□□ -1.35
ERCC3P19447 POU5F1P7-201ENST00000508759 541 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.63□□□□□ -1.35
ERCC3P19447 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.63□□□□□ -1.35
ERCC3P19447 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC3P19447 AC087883.1-201ENST00000551882 391 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC6.63□□□□□ -1.35
ERCC3P19447 LINC00561-201ENST00000565815 2738 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 AC005771.1-201ENST00000585581 349 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 AC011477.5-201ENST00000586571 259 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC6.63□□□□□ -1.35
ERCC3P19447 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.63□□□□□ -1.35
ERCC3P19447 AL133338.2-201ENST00000604292 736 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 AC090186.1-201ENST00000605991 572 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 AC087241.4-201ENST00000612441 480 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 MESTIT1_2.1-201ENST00000616328 235 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 AC116165.2-201ENST00000616705 206 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 DLEU1_2.1-201ENST00000617920 342 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.63□□□□□ -1.35
ERCC3P19447 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC6.63□□□□□ -1.35
ERCC3P19447 PACRG-211ENST00000621363 360 ntTSL 5 BASIC6.63□□□□□ -1.35
ERCC3P19447 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC6.63□□□□□ -1.35
ERCC3P19447 AC068137.3-201ENST00000639191 341 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 AC073869.6-201ENST00000640656 341 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 OR52B5P-202ENST00000641118 1110 ntBASIC6.63□□□□□ -1.35
ERCC3P19447 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC6.63□□□□□ -1.35
ERCC3P19447 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC3P19447 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC3P19447 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.63□□□□□ -1.35
ERCC3P19447 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.63□□□□□ -1.35
ERCC3P19447 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC3P19447 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.63□□□□□ -1.35
ERCC3P19447 RAPGEF4-203ENST00000397087 4120 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC3P19447 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC3P19447 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC3P19447 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC3P19447 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.62□□□□□ -1.35
ERCC3P19447 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC3P19447 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC3P19447 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC3P19447 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC6.62□□□□□ -1.35
ERCC3P19447 GDI2P1-201ENST00000429312 1336 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC3P19447 RNU1-19P-201ENST00000363306 165 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 RNA5SP131-201ENST00000365452 119 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
ERCC3P19447 RNU4-34P-201ENST00000410431 124 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC3P19447 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC3P19447 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC3P19447 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC6.62□□□□□ -1.35
ERCC3P19447 AC023347.2-201ENST00000433994 462 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 AL162739.1-201ENST00000450606 307 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC6.62□□□□□ -1.35
ERCC3P19447 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.62□□□□□ -1.35
ERCC3P19447 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC3P19447 RNU7-136P-201ENST00000458819 69 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 OR52A4P-201ENST00000472867 958 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 AC005726.1-201ENST00000494679 427 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 AC106872.3-201ENST00000495104 446 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC6.62□□□□□ -1.35
ERCC3P19447 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC6.62□□□□□ -1.35
ERCC3P19447 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC3P19447 RN7SKP298-201ENST00000515950 94 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 NRBF2P4-201ENST00000520874 850 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 AC068587.4-201ENST00000533893 186 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC6.62□□□□□ -1.35
ERCC3P19447 LARP7P2-201ENST00000575306 125 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.62□□□□□ -1.35
ERCC3P19447 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC3P19447 NDUFA8P1-201ENST00000605525 367 ntBASIC6.62□□□□□ -1.35
ERCC3P19447 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.62□□□□□ -1.35
ERCC3P19447 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.62□□□□□ -1.35
ERCC3P19447 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.62□□□□□ -1.35
ERCC3P19447 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC3P19447 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC3P19447 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
ERCC3P19447 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.62□□□□□ -1.35
ERCC3P19447 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC3P19447 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.62□□□□□ -1.35
ERCC3P19447 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 119.4 ms