Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.85□□□□□ -1.63
RB1P06400 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
RB1P06400 AL359837.1-201ENST00000381357 287 ntBASIC4.85□□□□□ -1.63
RB1P06400 PPIAP31-201ENST00000405422 495 ntBASIC4.85□□□□□ -1.63
RB1P06400 AC092745.2-202ENST00000411880 369 ntBASIC4.85□□□□□ -1.63
RB1P06400 AL389915.1-201ENST00000422463 466 ntBASIC4.85□□□□□ -1.63
RB1P06400 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.85□□□□□ -1.63
RB1P06400 TRBV26OR9-2-201ENST00000432077 293 ntBASIC4.85□□□□□ -1.63
RB1P06400 RPS3AP54-201ENST00000435535 734 ntBASIC4.85□□□□□ -1.63
RB1P06400 RPL12P46-201ENST00000436610 195 ntBASIC4.85□□□□□ -1.63
RB1P06400 AC092170.1-201ENST00000440211 356 ntBASIC4.85□□□□□ -1.63
RB1P06400 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RB1P06400 BTF3P6-201ENST00000448054 499 ntBASIC4.85□□□□□ -1.63
RB1P06400 ISCUP1-201ENST00000454451 448 ntBASIC4.85□□□□□ -1.63
RB1P06400 TPT1P1-201ENST00000458495 518 ntBASIC4.85□□□□□ -1.63
RB1P06400 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.85□□□□□ -1.63
RB1P06400 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.85□□□□□ -1.63
RB1P06400 AC093801.2-201ENST00000503966 1050 ntBASIC4.85□□□□□ -1.63
RB1P06400 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.85□□□□□ -1.63
RB1P06400 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.85□□□□□ -1.63
RB1P06400 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.85□□□□□ -1.63
RB1P06400 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC4.85□□□□□ -1.63
RB1P06400 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.85□□□□□ -1.63
RB1P06400 AC023825.1-201ENST00000566704 1030 ntBASIC4.85□□□□□ -1.63
RB1P06400 AC010735.1-201ENST00000567305 1026 ntBASIC4.85□□□□□ -1.63
RB1P06400 AC018552.3-201ENST00000567416 561 ntBASIC4.85□□□□□ -1.63
RB1P06400 AC115085.1-201ENST00000588924 229 ntBASIC4.85□□□□□ -1.63
RB1P06400 AP002906.1-201ENST00000603405 233 ntBASIC4.85□□□□□ -1.63
RB1P06400 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC4.85□□□□□ -1.63
RB1P06400 AC090506.2-201ENST00000624521 419 ntBASIC4.85□□□□□ -1.63
RB1P06400 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.85□□□□□ -1.63
RB1P06400 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.85□□□□□ -1.63
RB1P06400 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RB1P06400 CASC19-261ENST00000641853 1638 ntBASIC4.85□□□□□ -1.63
RB1P06400 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
RB1P06400 AP000542.2-201ENST00000623199 6179 ntBASIC4.85□□□□□ -1.63
RB1P06400 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
RB1P06400 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
RB1P06400 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.85□□□□□ -1.63
RB1P06400 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RB1P06400 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
RB1P06400 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RB1P06400 AP001642.1-201ENST00000624727 2117 ntBASIC4.84□□□□□ -1.63
RB1P06400 CASC19-204ENST00000641001 2055 ntBASIC4.84□□□□□ -1.63
RB1P06400 Z95327.2-201ENST00000414579 1873 ntBASIC4.84□□□□□ -1.63
RB1P06400 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RB1P06400 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
RB1P06400 DDX18P5-201ENST00000534547 1306 ntBASIC4.84□□□□□ -1.63
RB1P06400 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RB1P06400 MDM2-203ENST00000299252 966 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RB1P06400 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RB1P06400 RNU5B-4P-201ENST00000363508 111 ntBASIC4.84□□□□□ -1.63
RB1P06400 RNU6-932P-201ENST00000391108 106 ntBASIC4.84□□□□□ -1.63
RB1P06400 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
RB1P06400 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC4.84□□□□□ -1.63
RB1P06400 AC115285.1-201ENST00000424879 736 ntBASIC4.84□□□□□ -1.63
RB1P06400 AC009965.2-201ENST00000425328 970 ntBASIC4.84□□□□□ -1.63
RB1P06400 AC073069.1-201ENST00000428657 441 ntBASIC4.84□□□□□ -1.63
RB1P06400 DYNLL1P7-201ENST00000429273 258 ntBASIC4.84□□□□□ -1.63
RB1P06400 CDY14P-201ENST00000431260 1014 ntBASIC4.84□□□□□ -1.63
RB1P06400 YWHAEP5-201ENST00000431545 765 ntBASIC4.84□□□□□ -1.63
RB1P06400 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.84□□□□□ -1.63
RB1P06400 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC4.84□□□□□ -1.63
RB1P06400 CDY12P-201ENST00000440679 1015 ntBASIC4.84□□□□□ -1.63
RB1P06400 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC4.84□□□□□ -1.63
RB1P06400 CDY13P-201ENST00000445813 1015 ntBASIC4.84□□□□□ -1.63
RB1P06400 CDY23P-201ENST00000451661 1014 ntBASIC4.84□□□□□ -1.63
RB1P06400 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC4.84□□□□□ -1.63
RB1P06400 CCNB1IP1P3-201ENST00000454702 829 ntBASIC4.84□□□□□ -1.63
RB1P06400 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
RB1P06400 AC022034.3-201ENST00000471393 478 ntBASIC4.84□□□□□ -1.63
RB1P06400 RPS4XP6-201ENST00000477670 797 ntBASIC4.84□□□□□ -1.63
RB1P06400 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.84□□□□□ -1.63
RB1P06400 AP002812.1-201ENST00000495378 474 ntBASIC4.84□□□□□ -1.63
RB1P06400 AC010374.2-201ENST00000512933 535 ntBASIC4.84□□□□□ -1.63
RB1P06400 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.84□□□□□ -1.63
RB1P06400 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.84□□□□□ -1.63
RB1P06400 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.84□□□□□ -1.63
RB1P06400 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC4.84□□□□□ -1.63
RB1P06400 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.84□□□□□ -1.63
RB1P06400 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC4.84□□□□□ -1.63
RB1P06400 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC4.84□□□□□ -1.63
RB1P06400 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
RB1P06400 AC095057.3-201ENST00000567102 1157 ntBASIC4.84□□□□□ -1.63
RB1P06400 MTND4LP24-201ENST00000572277 291 ntBASIC4.84□□□□□ -1.63
RB1P06400 AC006130.2-201ENST00000586202 326 ntBASIC4.84□□□□□ -1.63
RB1P06400 AC011492.1-201ENST00000600023 315 ntBASIC4.84□□□□□ -1.63
RB1P06400 AL391834.2-201ENST00000609982 546 ntBASIC4.84□□□□□ -1.63
RB1P06400 AC124016.2-201ENST00000610058 665 ntBASIC4.84□□□□□ -1.63
RB1P06400 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC4.84□□□□□ -1.63
RB1P06400 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC4.84□□□□□ -1.63
RB1P06400 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC4.84□□□□□ -1.63
RB1P06400 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
RB1P06400 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.84□□□□□ -1.64
RB1P06400 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC4.83□□□□□ -1.64
RB1P06400 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.83□□□□□ -1.64
RB1P06400 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.83□□□□□ -1.64
RB1P06400 AL034370.1-201ENST00000397254 1590 ntBASIC4.83□□□□□ -1.64
RB1P06400 MAPK10-286ENST00000641208 8747 ntBASIC4.83□□□□□ -1.64
RB1P06400 KCNRG-201ENST00000312942 1527 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms