Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
HMGN1P05114 AL133383.2-201ENST00000622958 2336 ntBASIC3.64□□□□□ -1.83
HMGN1P05114 LINC00561-201ENST00000565815 2738 ntBASIC3.64□□□□□ -1.83
HMGN1P05114 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGN1P05114 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGN1P05114 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGN1P05114 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGN1P05114 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
HMGN1P05114 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGN1P05114 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGN1P05114 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGN1P05114 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGN1P05114 RNA5SP105-201ENST00000391123 113 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 HMGN2P8-201ENST00000391458 268 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 RPL7AP73-201ENST00000413490 353 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 AC127526.1-201ENST00000417526 366 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGN1P05114 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGN1P05114 IFNNP1-201ENST00000429219 553 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC3.63□□□□□ -1.83
HMGN1P05114 HMGB1P37-201ENST00000439613 609 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGN1P05114 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGN1P05114 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGN1P05114 TXNP2-201ENST00000443918 295 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGN1P05114 MTCO3P20-201ENST00000454926 688 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 RPL23AP24-201ENST00000458203 385 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 RNU6-1218P-201ENST00000458990 108 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 RPL38P1-201ENST00000460914 211 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGN1P05114 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGN1P05114 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.63□□□□□ -1.83
HMGN1P05114 BTF3L4P4-201ENST00000506381 449 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGN1P05114 RNU6-347P-201ENST00000516658 105 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.63□□□□□ -1.83
HMGN1P05114 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.63□□□□□ -1.83
HMGN1P05114 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGN1P05114 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGN1P05114 ZNF192P1-203ENST00000565888 810 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGN1P05114 AL161729.3-201ENST00000603533 673 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.63□□□□□ -1.83
HMGN1P05114 AP000894.4-201ENST00000610185 483 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 AL450489.1-201ENST00000612071 468 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGN1P05114 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
HMGN1P05114 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGN1P05114 OR51F2-202ENST00000641672 1136 ntAPPRIS P2 BASIC3.63□□□□□ -1.83
HMGN1P05114 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.63□□□□□ -1.83
HMGN1P05114 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
HMGN1P05114 ZNF542P-204ENST00000482727 1305 ntBASIC3.63□□□□□ -1.83
HMGN1P05114 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
HMGN1P05114 AL137100.1-201ENST00000556703 1620 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 AL132640.2-201ENST00000559968 1698 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 AC017002.4-201ENST00000604721 1525 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HMGN1P05114 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGN1P05114 HMGB3P19-201ENST00000403971 560 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGN1P05114 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 VN1R31P-201ENST00000417498 730 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGN1P05114 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGN1P05114 COX6B1P7-201ENST00000430845 235 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGN1P05114 AC092809.1-201ENST00000441469 474 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGN1P05114 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGN1P05114 FCF1P7-201ENST00000451185 558 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 RPL12P26-201ENST00000452430 487 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGN1P05114 RN7SL93P-201ENST00000463035 293 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGN1P05114 AC004069.2-201ENST00000505438 1114 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 AC111000.3-201ENST00000508057 576 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGN1P05114 OR7E10P-201ENST00000526420 991 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.62□□□□□ -1.83
HMGN1P05114 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.62□□□□□ -1.83
HMGN1P05114 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC3.62□□□□□ -1.83
HMGN1P05114 AC006270.2-201ENST00000578523 652 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.62□□□□□ -1.83
HMGN1P05114 FAM106CP-201ENST00000582212 507 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGN1P05114 AC008121.2-201ENST00000614647 523 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 AL139089.1-201ENST00000620372 975 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
HMGN1P05114 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGN1P05114 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.62□□□□□ -1.83
HMGN1P05114 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.62□□□□□ -1.83
HMGN1P05114 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
HMGN1P05114 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HMGN1P05114 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
HMGN1P05114 AC025125.1-201ENST00000624743 1922 ntBASIC3.62□□□□□ -1.83
HMGN1P05114 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
HMGN1P05114 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.61□□□□□ -1.83
HMGN1P05114 SPATA2P1-201ENST00000431223 2055 ntBASIC3.61□□□□□ -1.83
HMGN1P05114 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms