Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.53□□□□□ -1.68
LDLRP01130 CETN4P-201ENST00000432407 469 ntBASIC4.53□□□□□ -1.68
LDLRP01130 RPL12P46-201ENST00000436610 195 ntBASIC4.53□□□□□ -1.68
LDLRP01130 ARF4P4-201ENST00000439608 520 ntBASIC4.53□□□□□ -1.68
LDLRP01130 HSFY3P-201ENST00000444242 1191 ntBASIC4.53□□□□□ -1.68
LDLRP01130 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.53□□□□□ -1.68
LDLRP01130 ARL5AP2-201ENST00000444698 533 ntBASIC4.53□□□□□ -1.68
LDLRP01130 TCEA1P1-201ENST00000449716 880 ntBASIC4.53□□□□□ -1.68
LDLRP01130 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
LDLRP01130 GTF2IP12-201ENST00000456547 356 ntBASIC4.53□□□□□ -1.68
LDLRP01130 RPL7AP52-201ENST00000458096 790 ntBASIC4.53□□□□□ -1.68
LDLRP01130 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
LDLRP01130 RN7SL319P-201ENST00000480656 221 ntBASIC4.53□□□□□ -1.68
LDLRP01130 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC4.53□□□□□ -1.68
LDLRP01130 AK3P4-201ENST00000504283 583 ntBASIC4.53□□□□□ -1.68
LDLRP01130 BOLA3P3-201ENST00000505182 232 ntBASIC4.53□□□□□ -1.68
LDLRP01130 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC4.53□□□□□ -1.68
LDLRP01130 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.53□□□□□ -1.68
LDLRP01130 RNU6-709P-201ENST00000517257 104 ntBASIC4.53□□□□□ -1.68
LDLRP01130 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC4.53□□□□□ -1.68
LDLRP01130 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC4.53□□□□□ -1.68
LDLRP01130 LRRC34P1-201ENST00000542742 915 ntBASIC4.53□□□□□ -1.68
LDLRP01130 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC4.53□□□□□ -1.68
LDLRP01130 NMNAT1P1-201ENST00000554095 876 ntBASIC4.53□□□□□ -1.68
LDLRP01130 AC068446.3-201ENST00000555285 382 ntBASIC4.53□□□□□ -1.68
LDLRP01130 HMGB3P26-201ENST00000560051 582 ntBASIC4.53□□□□□ -1.68
LDLRP01130 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC4.53□□□□□ -1.68
LDLRP01130 AC018552.3-201ENST00000567416 561 ntBASIC4.53□□□□□ -1.68
LDLRP01130 MIR4277-201ENST00000578298 84 ntBASIC4.53□□□□□ -1.68
LDLRP01130 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC4.53□□□□□ -1.68
LDLRP01130 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.53□□□□□ -1.68
LDLRP01130 BNIP3P22-201ENST00000593399 556 ntBASIC4.53□□□□□ -1.68
LDLRP01130 ZNF92P3-201ENST00000596594 954 ntBASIC4.53□□□□□ -1.68
LDLRP01130 BNIP3P33-201ENST00000598912 569 ntBASIC4.53□□□□□ -1.68
LDLRP01130 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.53□□□□□ -1.68
LDLRP01130 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC4.53□□□□□ -1.68
LDLRP01130 AC123786.2-201ENST00000603459 275 ntBASIC4.53□□□□□ -1.68
LDLRP01130 AC103792.1-201ENST00000603591 919 ntBASIC4.53□□□□□ -1.68
LDLRP01130 AC105254.2-201ENST00000603636 436 ntBASIC4.53□□□□□ -1.68
LDLRP01130 AC233280.2-201ENST00000603917 1070 ntBASIC4.53□□□□□ -1.68
LDLRP01130 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.53□□□□□ -1.68
LDLRP01130 AP001521.2-201ENST00000608772 546 ntBASIC4.53□□□□□ -1.68
LDLRP01130 OR2BH1P-201ENST00000608850 864 ntBASIC4.53□□□□□ -1.68
LDLRP01130 AC055764.2-201ENST00000610089 670 ntBASIC4.53□□□□□ -1.68
LDLRP01130 AC087683.2-201ENST00000611384 326 ntBASIC4.53□□□□□ -1.68
LDLRP01130 TMEM154-204ENST00000613578 486 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
LDLRP01130 AC068724.3-201ENST00000625906 87 ntBASIC4.53□□□□□ -1.68
LDLRP01130 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.53□□□□□ -1.68
LDLRP01130 BMS1P21-201ENST00000634565 365 ntBASIC4.53□□□□□ -1.68
LDLRP01130 MIR6830-201ENST00000636015 70 ntBASIC4.53□□□□□ -1.68
LDLRP01130 MTND2P41-201ENST00000637599 773 ntBASIC4.53□□□□□ -1.68
LDLRP01130 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.53□□□□□ -1.68
LDLRP01130 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
LDLRP01130 ZNF849P-201ENST00000594711 1566 ntBASIC4.53□□□□□ -1.69
LDLRP01130 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LDLRP01130 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.52□□□□□ -1.69
LDLRP01130 AL445437.1-201ENST00000623157 3087 ntBASIC4.52□□□□□ -1.69
LDLRP01130 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LDLRP01130 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.52□□□□□ -1.69
LDLRP01130 FAM3C2-201ENST00000312214 681 ntBASIC4.52□□□□□ -1.69
LDLRP01130 RNA5SP191-201ENST00000362585 102 ntBASIC4.52□□□□□ -1.69
LDLRP01130 SAMD13-202ENST00000370669 856 ntAPPRIS P1 TSL 3 BASIC4.52□□□□□ -1.69
LDLRP01130 MIR921-201ENST00000401133 56 ntBASIC4.52□□□□□ -1.69
LDLRP01130 AL021331.1-201ENST00000402817 582 ntBASIC4.52□□□□□ -1.69
LDLRP01130 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.52□□□□□ -1.69
LDLRP01130 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC4.52□□□□□ -1.69
LDLRP01130 AC246680.2-201ENST00000422106 389 ntBASIC4.52□□□□□ -1.69
LDLRP01130 CHIAP3-201ENST00000423668 1133 ntBASIC4.52□□□□□ -1.69
LDLRP01130 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.52□□□□□ -1.69
LDLRP01130 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.52□□□□□ -1.69
LDLRP01130 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.52□□□□□ -1.69
LDLRP01130 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.52□□□□□ -1.69
LDLRP01130 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
LDLRP01130 IGHV5-78-201ENST00000450948 295 ntBASIC4.52□□□□□ -1.69
LDLRP01130 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.52□□□□□ -1.69
LDLRP01130 AC010326.1-201ENST00000462726 602 ntBASIC4.52□□□□□ -1.69
LDLRP01130 MTCO2P6-201ENST00000463134 685 ntBASIC4.52□□□□□ -1.69
LDLRP01130 RPL7AP28-201ENST00000464513 571 ntBASIC4.52□□□□□ -1.69
LDLRP01130 RPL23AP65-201ENST00000475608 468 ntBASIC4.52□□□□□ -1.69
LDLRP01130 RNU6-276P-201ENST00000516114 96 ntBASIC4.52□□□□□ -1.69
LDLRP01130 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC4.52□□□□□ -1.69
LDLRP01130 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC4.52□□□□□ -1.69
LDLRP01130 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.52□□□□□ -1.69
LDLRP01130 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC4.52□□□□□ -1.69
LDLRP01130 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.52□□□□□ -1.69
LDLRP01130 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC4.52□□□□□ -1.69
LDLRP01130 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.52□□□□□ -1.69
LDLRP01130 MTCYBP27-201ENST00000555160 670 ntBASIC4.52□□□□□ -1.69
LDLRP01130 AL022067.1-201ENST00000602426 454 ntBASIC4.52□□□□□ -1.69
LDLRP01130 AL445435.1-201ENST00000604232 665 ntBASIC4.52□□□□□ -1.69
LDLRP01130 AL109618.2-201ENST00000605527 211 ntBASIC4.52□□□□□ -1.69
LDLRP01130 AL392048.1-201ENST00000613946 534 ntBASIC4.52□□□□□ -1.69
LDLRP01130 AL590396.4-201ENST00000636779 956 ntBASIC4.52□□□□□ -1.69
LDLRP01130 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
LDLRP01130 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
LDLRP01130 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
LDLRP01130 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.52□□□□□ -1.69
LDLRP01130 LINC01109-201ENST00000603837 3081 ntBASIC4.52□□□□□ -1.69
LDLRP01130 KARSP3-201ENST00000571212 1504 ntBASIC4.51□□□□□ -1.69
LDLRP01130 AC008758.3-201ENST00000507003 1829 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms