Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 HMGB1P16-201ENST00000447155 540 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 NANOGP10-201ENST00000453325 895 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 U8.18-201ENST00000459285 133 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 ANK3-207ENST00000460468 677 ntTSL 3 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 RN7SL809P-201ENST00000482040 297 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 LINC01339-203ENST00000519336 561 ntTSL 3 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 OR7E13P-201ENST00000526052 910 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 CYCSP30-201ENST00000546447 172 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 AC011468.1-201ENST00000569091 675 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTDNEP1O95476 AC141257.3-201ENST00000572906 215 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 MIR3160-1-201ENST00000577972 85 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 AC244505.7-201ENST00000599675 272 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 AC020978.9-201ENST00000624380 1141 ntBASIC4.32□□□□□ -1.72
CTDNEP1O95476 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTDNEP1O95476 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC4.32□□□□□ -1.72
CTDNEP1O95476 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTDNEP1O95476 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTDNEP1O95476 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTDNEP1O95476 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTDNEP1O95476 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
CTDNEP1O95476 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CTDNEP1O95476 CUL4AP1-201ENST00000514750 1863 ntBASIC4.31□□□□□ -1.72
CTDNEP1O95476 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.31□□□□□ -1.72
CTDNEP1O95476 OR52B1P-201ENST00000316506 909 ntBASIC4.31□□□□□ -1.72
CTDNEP1O95476 RN7SKP280-201ENST00000364196 304 ntBASIC4.31□□□□□ -1.72
CTDNEP1O95476 AL391417.1-201ENST00000404100 426 ntBASIC4.31□□□□□ -1.72
CTDNEP1O95476 SNORA81-201ENST00000408493 178 ntBASIC4.31□□□□□ -1.72
CTDNEP1O95476 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC4.31□□□□□ -1.72
CTDNEP1O95476 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC4.31□□□□□ -1.72
CTDNEP1O95476 AL590609.2-201ENST00000421430 368 ntBASIC4.31□□□□□ -1.72
CTDNEP1O95476 AL355994.1-201ENST00000424379 260 ntBASIC4.31□□□□□ -1.72
CTDNEP1O95476 AL591419.1-201ENST00000427423 339 ntBASIC4.31□□□□□ -1.72
CTDNEP1O95476 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC4.31□□□□□ -1.72
CTDNEP1O95476 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC4.31□□□□□ -1.72
CTDNEP1O95476 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.31□□□□□ -1.72
CTDNEP1O95476 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTDNEP1O95476 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC4.31□□□□□ -1.72
CTDNEP1O95476 HSPE1P22-201ENST00000456856 327 ntBASIC4.31□□□□□ -1.72
CTDNEP1O95476 AL133162.1-201ENST00000463228 453 ntBASIC4.31□□□□□ -1.72
CTDNEP1O95476 RPS20P21-201ENST00000466859 343 ntBASIC4.31□□□□□ -1.72
CTDNEP1O95476 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC4.31□□□□□ -1.72
CTDNEP1O95476 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC4.31□□□□□ -1.72
CTDNEP1O95476 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.31□□□□□ -1.72
CTDNEP1O95476 AC067838.1-201ENST00000606064 577 ntBASIC4.31□□□□□ -1.72
CTDNEP1O95476 CD36-221ENST00000534394 1741 ntTSL 2 BASIC4.31□□□□□ -1.72
CTDNEP1O95476 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTDNEP1O95476 MFSD8-236ENST00000641509 4050 ntBASIC4.31□□□□□ -1.72
CTDNEP1O95476 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTDNEP1O95476 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTDNEP1O95476 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.31□□□□□ -1.72
CTDNEP1O95476 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.31□□□□□ -1.72
CTDNEP1O95476 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTDNEP1O95476 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTDNEP1O95476 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC4.3□□□□□ -1.72
CTDNEP1O95476 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CTDNEP1O95476 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
CTDNEP1O95476 GCNT6-201ENST00000379591 934 ntBASIC4.3□□□□□ -1.72
CTDNEP1O95476 TCEA1P2-201ENST00000420496 906 ntBASIC4.3□□□□□ -1.72
CTDNEP1O95476 MTND4LP12-201ENST00000448237 295 ntBASIC4.3□□□□□ -1.72
CTDNEP1O95476 GAPDHP36-201ENST00000480688 918 ntBASIC4.3□□□□□ -1.72
CTDNEP1O95476 AC016687.1-201ENST00000482574 353 ntBASIC4.3□□□□□ -1.72
CTDNEP1O95476 RNA5SP164-201ENST00000516533 110 ntBASIC4.3□□□□□ -1.72
CTDNEP1O95476 MIR2116-201ENST00000517221 80 ntBASIC4.3□□□□□ -1.72
CTDNEP1O95476 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.3□□□□□ -1.72
CTDNEP1O95476 HSPE1P5-201ENST00000561489 272 ntBASIC4.3□□□□□ -1.72
CTDNEP1O95476 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTDNEP1O95476 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CTDNEP1O95476 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.3□□□□□ -1.72
CTDNEP1O95476 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
CTDNEP1O95476 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CTDNEP1O95476 HSPA8P17-201ENST00000427029 1382 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
CTDNEP1O95476 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTDNEP1O95476 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTDNEP1O95476 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
CTDNEP1O95476 AC019155.1-201ENST00000382242 574 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 RNU6-178P-201ENST00000384631 104 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 TCEA1P4-201ENST00000415066 844 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 SAGE2P-201ENST00000420011 2126 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 AC010307.1-201ENST00000467206 836 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
CTDNEP1O95476 STRADBP1-201ENST00000478954 1281 ntBASIC4.29□□□□□ -1.72
CTDNEP1O95476 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms