Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC095038.2-201ENST00000621464 1070 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AL392088.2-201ENST00000637607 285 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
USH2AO75445 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
USH2AO75445 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC1.66□□□□□ -2.14
USH2AO75445 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC1.66□□□□□ -2.14
USH2AO75445 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC1.66□□□□□ -2.14
USH2AO75445 OR5H2-201ENST00000355273 945 ntBASIC1.66□□□□□ -2.14
USH2AO75445 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
USH2AO75445 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC1.66□□□□□ -2.14
USH2AO75445 AC026784.1-201ENST00000507986 352 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC1.66□□□□□ -2.14
USH2AO75445 AC008885.1-201ENST00000514930 301 ntBASIC1.66□□□□□ -2.14
USH2AO75445 IGKV2-26-201ENST00000518305 343 ntBASIC1.66□□□□□ -2.14
USH2AO75445 MIR4276-201ENST00000584832 70 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AC004832.5-201ENST00000608677 401 ntBASIC1.66□□□□□ -2.14
USH2AO75445 AL592295.2-201ENST00000612578 206 ntBASIC1.66□□□□□ -2.14
USH2AO75445 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 ZNF37BP-202ENST00000452075 8637 ntTSL 2 BASIC1.66□□□□□ -2.14
USH2AO75445 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC1.66□□□□□ -2.14
USH2AO75445 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC1.66□□□□□ -2.14
USH2AO75445 DSP-202ENST00000418664 7812 ntAPPRIS ALT2 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC1.66□□□□□ -2.14
USH2AO75445 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
USH2AO75445 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
USH2AO75445 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.14
USH2AO75445 OR13C3-201ENST00000374781 1108 ntBASIC1.65□□□□□ -2.14
USH2AO75445 AL034403.1-201ENST00000399414 885 ntBASIC1.65□□□□□ -2.14
USH2AO75445 ATP5F1P6-201ENST00000402768 767 ntBASIC1.65□□□□□ -2.14
USH2AO75445 BMS1P22-201ENST00000414726 313 ntBASIC1.65□□□□□ -2.14
USH2AO75445 RPL7P36-201ENST00000444633 681 ntBASIC1.65□□□□□ -2.14
USH2AO75445 TAF8-207ENST00000482432 556 ntTSL 2 BASIC1.65□□□□□ -2.14
USH2AO75445 AC078814.3-201ENST00000553036 491 ntBASIC1.65□□□□□ -2.14
USH2AO75445 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC1.65□□□□□ -2.14
USH2AO75445 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC1.65□□□□□ -2.14
USH2AO75445 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC1.65□□□□□ -2.14
USH2AO75445 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC1.65□□□□□ -2.14
USH2AO75445 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC1.65□□□□□ -2.14
USH2AO75445 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
USH2AO75445 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
USH2AO75445 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.14
USH2AO75445 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
USH2AO75445 AC027287.1-201ENST00000553115 1453 ntBASIC1.65□□□□□ -2.14
USH2AO75445 AC007390.2-201ENST00000606229 3803 ntBASIC1.65□□□□□ -2.14
USH2AO75445 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
USH2AO75445 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC1.65□□□□□ -2.14
USH2AO75445 UNC79-201ENST00000256339 8400 ntAPPRIS P2 TSL 5 BASIC1.65□□□□□ -2.14
USH2AO75445 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
USH2AO75445 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC1.65□□□□□ -2.14
USH2AO75445 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC1.65□□□□□ -2.14
USH2AO75445 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.14
USH2AO75445 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC1.65□□□□□ -2.14
USH2AO75445 MTND4LP17-201ENST00000414607 293 ntBASIC1.65□□□□□ -2.14
USH2AO75445 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.65□□□□□ -2.14
USH2AO75445 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC1.65□□□□□ -2.14
USH2AO75445 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC1.65□□□□□ -2.14
USH2AO75445 RPS29P21-201ENST00000496272 170 ntBASIC1.65□□□□□ -2.14
USH2AO75445 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC1.65□□□□□ -2.15
USH2AO75445 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
USH2AO75445 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC1.65□□□□□ -2.15
USH2AO75445 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
USH2AO75445 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 AC140134.1-201ENST00000511830 3544 ntBASIC1.65□□□□□ -2.15
USH2AO75445 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 AL672167.1-204ENST00000641875 3017 ntBASIC1.65□□□□□ -2.15
USH2AO75445 Y_RNA.4-201ENST00000362333 112 ntBASIC1.65□□□□□ -2.15
USH2AO75445 RNA5SP197-201ENST00000363357 119 ntBASIC1.65□□□□□ -2.15
USH2AO75445 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.65□□□□□ -2.15
USH2AO75445 AC008413.1-201ENST00000511864 177 ntBASIC1.65□□□□□ -2.15
USH2AO75445 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC1.65□□□□□ -2.15
USH2AO75445 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC1.65□□□□□ -2.15
USH2AO75445 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC1.65□□□□□ -2.15
USH2AO75445 AL512310.1-201ENST00000548639 172 ntBASIC1.65□□□□□ -2.15
USH2AO75445 AC092435.3-201ENST00000565538 3654 ntBASIC1.65□□□□□ -2.15
USH2AO75445 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 ARHGAP32-201ENST00000310343 10111 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 AL137918.1-201ENST00000624542 1922 ntBASIC1.65□□□□□ -2.15
USH2AO75445 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
USH2AO75445 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
USH2AO75445 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
USH2AO75445 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC1.65□□□□□ -2.15
USH2AO75445 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
USH2AO75445 RNU1-44P-201ENST00000384453 163 ntBASIC1.65□□□□□ -2.15
USH2AO75445 AL078604.1-201ENST00000404609 466 ntBASIC1.65□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms