Protein–RNA interactions for Protein: O75351

VPS4B, Vacuolar protein sorting-associated protein 4B, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4BO75351 AC015724.1-201ENST00000478577 156 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 RPS27P23-201ENST00000487608 251 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 AC007686.1-201ENST00000488511 463 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS4BO75351 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS4BO75351 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS4BO75351 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
VPS4BO75351 HSPE1P23-201ENST00000509838 286 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 AC092436.2-201ENST00000515188 411 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS4BO75351 RNA5SP135-201ENST00000517019 125 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS4BO75351 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS4BO75351 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS4BO75351 AC007115.1-201ENST00000546853 234 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 AC023161.2-201ENST00000551218 780 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 AL390334.1-201ENST00000556395 450 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS4BO75351 ACTR3BP3-201ENST00000565577 979 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS4BO75351 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS4BO75351 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS4BO75351 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS4BO75351 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.13□□□□□ -1.59
VPS4BO75351 GMFG-202ENST00000594700 397 ntTSL 2 BASIC5.13□□□□□ -1.59
VPS4BO75351 AC103881.1-201ENST00000603476 538 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 AC011626.1-201ENST00000604710 562 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 AC018714.1-201ENST00000605028 208 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS4BO75351 AC131235.4-201ENST00000609288 620 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS4BO75351 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS4BO75351 AL133243.1-201ENST00000614487 366 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 BX005214.3-202ENST00000619809 325 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 AC073348.1-201ENST00000623002 331 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 AP002799.1-201ENST00000623552 423 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC5.13□□□□□ -1.59
VPS4BO75351 AC116618.1-201ENST00000634617 774 ntBASIC5.13□□□□□ -1.59
VPS4BO75351 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
VPS4BO75351 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS4BO75351 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS4BO75351 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
VPS4BO75351 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
VPS4BO75351 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
VPS4BO75351 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4BO75351 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4BO75351 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4BO75351 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4BO75351 AC093591.2-201ENST00000565254 3843 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4BO75351 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS4BO75351 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS4BO75351 AKAP9-201ENST00000356239 12471 ntAPPRIS P2 TSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4BO75351 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
VPS4BO75351 Y_RNA.194-201ENST00000363985 102 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4BO75351 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4BO75351 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS4BO75351 TAF9BP1-201ENST00000396646 746 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4BO75351 RAB28P1-201ENST00000411517 641 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 AC016397.1-201ENST00000412463 242 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4BO75351 AL807761.1-201ENST00000417622 171 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4BO75351 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4BO75351 RPL7P4-203ENST00000430239 730 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 LINC00595-203ENST00000432742 683 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4BO75351 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS4BO75351 UBE2V1P5-201ENST00000440070 405 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 AL360221.1-201ENST00000445989 335 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4BO75351 AC105399.1-202ENST00000447303 205 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 NOP56P2-201ENST00000447491 769 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 AC104306.1-201ENST00000449702 371 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 TPT1P13-201ENST00000449760 499 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 TPMTP4-201ENST00000450749 678 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.12□□□□□ -1.59
VPS4BO75351 VPS13A-211ENST00000484581 1155 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS4BO75351 IGBP1P5-201ENST00000507524 1000 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS4BO75351 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4BO75351 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4BO75351 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4BO75351 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4BO75351 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4BO75351 AP004607.2-201ENST00000533949 322 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
VPS4BO75351 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 AC090751.1-201ENST00000566966 267 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 OR1F2P-201ENST00000570470 933 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC5.12□□□□□ -1.59
VPS4BO75351 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS4BO75351 NTAN1P1-201ENST00000603150 646 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 AC018695.5-201ENST00000605872 315 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS4BO75351 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC5.12□□□□□ -1.59
VPS4BO75351 AF246928.1-201ENST00000623768 87 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 AC098679.5-201ENST00000624394 571 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 ATE1-AS1-202ENST00000636460 506 ntBASIC5.12□□□□□ -1.59
VPS4BO75351 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms