Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHOX2O60902 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC4.01□□□□□ -1.77
SHOX2O60902 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.01□□□□□ -1.77
SHOX2O60902 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.01□□□□□ -1.77
SHOX2O60902 GMCL1P2-201ENST00000605230 823 ntBASIC4.01□□□□□ -1.77
SHOX2O60902 BNIP3P19-201ENST00000605397 577 ntBASIC4.01□□□□□ -1.77
SHOX2O60902 AL591424.2-201ENST00000617023 128 ntBASIC4.01□□□□□ -1.77
SHOX2O60902 AL139089.1-201ENST00000620372 975 ntBASIC4.01□□□□□ -1.77
SHOX2O60902 AC067852.7-201ENST00000623270 535 ntBASIC4.01□□□□□ -1.77
SHOX2O60902 AL049536.1-201ENST00000625043 744 ntBASIC4.01□□□□□ -1.77
SHOX2O60902 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SHOX2O60902 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
SHOX2O60902 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
SHOX2O60902 AC090017.1-201ENST00000548612 1779 ntBASIC4.01□□□□□ -1.77
SHOX2O60902 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHOX2O60902 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.01□□□□□ -1.77
SHOX2O60902 SLAIN1-204ENST00000358679 2075 ntAPPRIS P3 TSL 2 BASIC4.01□□□□□ -1.77
SHOX2O60902 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHOX2O60902 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHOX2O60902 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHOX2O60902 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
SHOX2O60902 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
SHOX2O60902 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.01□□□□□ -1.77
SHOX2O60902 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
SHOX2O60902 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC4□□□□□ -1.77
SHOX2O60902 RNA5SP479-201ENST00000364858 117 ntBASIC4□□□□□ -1.77
SHOX2O60902 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4□□□□□ -1.77
SHOX2O60902 TRAPPC2P10-201ENST00000415662 323 ntBASIC4□□□□□ -1.77
SHOX2O60902 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHOX2O60902 AL358472.1-201ENST00000431295 329 ntBASIC4□□□□□ -1.77
SHOX2O60902 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC4□□□□□ -1.77
SHOX2O60902 CDC27P1-201ENST00000445384 715 ntBASIC4□□□□□ -1.77
SHOX2O60902 AC098824.1-201ENST00000453565 980 ntBASIC4□□□□□ -1.77
SHOX2O60902 AL354710.1-201ENST00000453641 246 ntBASIC4□□□□□ -1.77
SHOX2O60902 SNORA70.14-201ENST00000516205 110 ntBASIC4□□□□□ -1.77
SHOX2O60902 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4□□□□□ -1.77
SHOX2O60902 AC034205.1-201ENST00000520621 638 ntBASIC4□□□□□ -1.77
SHOX2O60902 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4□□□□□ -1.77
SHOX2O60902 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHOX2O60902 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC4□□□□□ -1.77
SHOX2O60902 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4□□□□□ -1.77
SHOX2O60902 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC4□□□□□ -1.77
SHOX2O60902 MIR3186-201ENST00000577404 85 ntBASIC4□□□□□ -1.77
SHOX2O60902 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4□□□□□ -1.77
SHOX2O60902 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC4□□□□□ -1.77
SHOX2O60902 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4□□□□□ -1.77
SHOX2O60902 MIR6758-201ENST00000620653 63 ntBASIC4□□□□□ -1.77
SHOX2O60902 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SHOX2O60902 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHOX2O60902 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
SHOX2O60902 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC3.99□□□□□ -1.77
SHOX2O60902 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SHOX2O60902 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC3.99□□□□□ -1.77
SHOX2O60902 MFSD8-242ENST00000641690 4199 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC3.99□□□□□ -1.77
SHOX2O60902 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SHOX2O60902 MIR331-201ENST00000362302 94 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SHOX2O60902 P2RY10P2-201ENST00000416730 913 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHOX2O60902 OR5AW1P-201ENST00000426334 1006 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 IGKV1OR9-2-201ENST00000431378 277 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.99□□□□□ -1.77
SHOX2O60902 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.99□□□□□ -1.77
SHOX2O60902 RPL23AP52-201ENST00000439311 478 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SHOX2O60902 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.99□□□□□ -1.77
SHOX2O60902 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.99□□□□□ -1.77
SHOX2O60902 EIF4A2P2-201ENST00000455776 1070 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 AC005229.2-201ENST00000456995 399 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 MTCYBP14-201ENST00000457471 715 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 AC010468.1-201ENST00000461022 817 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 AC010326.1-201ENST00000462726 602 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 TRBV12-2-201ENST00000489763 344 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 RN7SKP209-201ENST00000516888 304 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 AC090819.1-201ENST00000523800 1111 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
SHOX2O60902 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC3.99□□□□□ -1.77
SHOX2O60902 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.99□□□□□ -1.77
SHOX2O60902 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.99□□□□□ -1.77
SHOX2O60902 AC018552.3-201ENST00000567416 561 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 VN1R79P-201ENST00000593540 513 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 AC100847.1-201ENST00000611316 481 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC3.99□□□□□ -1.77
SHOX2O60902 AC124312.6-202ENST00000623624 418 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.99□□□□□ -1.77
SHOX2O60902 ATE1-AS1-202ENST00000636460 506 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 OR5AC4P-202ENST00000642086 985 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SHOX2O60902 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHOX2O60902 AC106871.1-201ENST00000568324 3102 ntBASIC3.99□□□□□ -1.77
SHOX2O60902 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SHOX2O60902 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SHOX2O60902 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHOX2O60902 MFSD8-216ENST00000641147 4009 ntBASIC3.98□□□□□ -1.77
SHOX2O60902 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC3.98□□□□□ -1.77
SHOX2O60902 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.98□□□□□ -1.77
SHOX2O60902 OR5P1P-201ENST00000299512 925 ntBASIC3.98□□□□□ -1.77
SHOX2O60902 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SHOX2O60902 RNU6-525P-201ENST00000363685 104 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms