Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RPL7P53-201ENST00000421245 739 ntBASIC4.34□□□□□ -1.71
ZIC3O60481 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.34□□□□□ -1.71
ZIC3O60481 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.34□□□□□ -1.71
ZIC3O60481 USP9YP22-201ENST00000438971 294 ntBASIC4.34□□□□□ -1.71
ZIC3O60481 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC4.34□□□□□ -1.71
ZIC3O60481 COX6CP18-201ENST00000448769 222 ntBASIC4.34□□□□□ -1.71
ZIC3O60481 AL591623.2-201ENST00000449978 222 ntBASIC4.34□□□□□ -1.71
ZIC3O60481 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC4.34□□□□□ -1.71
ZIC3O60481 GYG1P1-201ENST00000460864 698 ntBASIC4.34□□□□□ -1.71
ZIC3O60481 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.34□□□□□ -1.71
ZIC3O60481 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC4.34□□□□□ -1.71
ZIC3O60481 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.34□□□□□ -1.71
ZIC3O60481 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.34□□□□□ -1.71
ZIC3O60481 NDUFB4P12-201ENST00000513465 390 ntBASIC4.34□□□□□ -1.71
ZIC3O60481 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC4.34□□□□□ -1.71
ZIC3O60481 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.34□□□□□ -1.71
ZIC3O60481 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.34□□□□□ -1.71
ZIC3O60481 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ZIC3O60481 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.34□□□□□ -1.71
ZIC3O60481 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
ZIC3O60481 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC4.34□□□□□ -1.71
ZIC3O60481 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.34□□□□□ -1.71
ZIC3O60481 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.34□□□□□ -1.71
ZIC3O60481 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.34□□□□□ -1.71
ZIC3O60481 AC115085.1-201ENST00000588924 229 ntBASIC4.34□□□□□ -1.71
ZIC3O60481 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.34□□□□□ -1.71
ZIC3O60481 BNIP3P26-201ENST00000600827 554 ntBASIC4.34□□□□□ -1.71
ZIC3O60481 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC4.34□□□□□ -1.71
ZIC3O60481 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC4.34□□□□□ -1.71
ZIC3O60481 AC131159.1-201ENST00000621854 213 ntBASIC4.34□□□□□ -1.71
ZIC3O60481 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.34□□□□□ -1.71
ZIC3O60481 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ZIC3O60481 DDX18P5-201ENST00000534547 1306 ntBASIC4.34□□□□□ -1.71
ZIC3O60481 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.71
ZIC3O60481 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
ZIC3O60481 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.72
ZIC3O60481 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.34□□□□□ -1.72
ZIC3O60481 OR9K1P-202ENST00000641111 3217 ntBASIC4.34□□□□□ -1.72
ZIC3O60481 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.72
ZIC3O60481 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ZIC3O60481 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZIC3O60481 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ZIC3O60481 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZIC3O60481 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.33□□□□□ -1.72
ZIC3O60481 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC4.33□□□□□ -1.72
ZIC3O60481 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZIC3O60481 AL512646.1-201ENST00000269395 1077 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZIC3O60481 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ZIC3O60481 LINC01967-201ENST00000356047 755 ntTSL 5 BASIC4.33□□□□□ -1.72
ZIC3O60481 Y_RNA.169-201ENST00000363745 96 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 RNVU1-6-201ENST00000364688 164 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ZIC3O60481 MIR217-201ENST00000384817 110 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
ZIC3O60481 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC4.33□□□□□ -1.72
ZIC3O60481 RAP1BP1-201ENST00000412709 553 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 BX510359.2-201ENST00000417920 305 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 AL121878.1-201ENST00000418638 859 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 PAICSP7-201ENST00000419829 962 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 GTF2IP23-201ENST00000423746 351 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 DPRXP1-201ENST00000426312 460 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.33□□□□□ -1.72
ZIC3O60481 Z93242.1-201ENST00000427102 353 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.33□□□□□ -1.72
ZIC3O60481 USP9YP31-201ENST00000431405 881 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.33□□□□□ -1.72
ZIC3O60481 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.33□□□□□ -1.72
ZIC3O60481 AC243772.1-201ENST00000451620 410 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 ANKRD26P4-201ENST00000455755 950 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC4.33□□□□□ -1.72
ZIC3O60481 VPS26AP1-201ENST00000483197 979 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 AC073358.1-201ENST00000505671 684 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 AC091868.1-201ENST00000508746 304 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC4.33□□□□□ -1.72
ZIC3O60481 AC105313.1-201ENST00000509121 353 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 MRPS33P3-201ENST00000513456 322 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 AC118465.1-201ENST00000513820 1271 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC4.33□□□□□ -1.72
ZIC3O60481 IGKV1-32-201ENST00000519290 311 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.33□□□□□ -1.72
ZIC3O60481 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.33□□□□□ -1.72
ZIC3O60481 AP003461.1-201ENST00000528866 78 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 AL390334.1-201ENST00000556395 450 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC4.33□□□□□ -1.72
ZIC3O60481 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.33□□□□□ -1.72
ZIC3O60481 MIR4270-201ENST00000581799 70 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC4.33□□□□□ -1.72
ZIC3O60481 AC004223.2-201ENST00000590309 544 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.33□□□□□ -1.72
ZIC3O60481 AC018638.7-201ENST00000605836 1114 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC4.33□□□□□ -1.72
ZIC3O60481 MIR6853-201ENST00000619642 74 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC4.33□□□□□ -1.72
ZIC3O60481 AC004777.1-201ENST00000624317 287 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 AC007490.1-201ENST00000624321 703 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 AC116563.2-201ENST00000624751 535 ntBASIC4.33□□□□□ -1.72
ZIC3O60481 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.33□□□□□ -1.72
ZIC3O60481 TM4SF1-202ENST00000472441 3115 ntTSL 2 BASIC4.33□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms