Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 VN1R74P-201ENST00000613259 503 ntBASIC4.65□□□□□ -1.67
LDB2O43679 AC234782.5-201ENST00000617723 324 ntBASIC4.65□□□□□ -1.67
LDB2O43679 VN1R7P-201ENST00000619242 903 ntBASIC4.65□□□□□ -1.67
LDB2O43679 AP001005.3-201ENST00000622049 129 ntBASIC4.65□□□□□ -1.67
LDB2O43679 AC145207.9-201ENST00000623802 325 ntBASIC4.65□□□□□ -1.67
LDB2O43679 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC4.65□□□□□ -1.67
LDB2O43679 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC4.65□□□□□ -1.67
LDB2O43679 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.65□□□□□ -1.67
LDB2O43679 PCAT14-202ENST00000627127 3935 ntBASIC4.65□□□□□ -1.67
LDB2O43679 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
LDB2O43679 AL355852.1-201ENST00000454081 1771 ntBASIC4.65□□□□□ -1.67
LDB2O43679 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.67
LDB2O43679 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.65□□□□□ -1.67
LDB2O43679 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
LDB2O43679 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
LDB2O43679 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC4.65□□□□□ -1.67
LDB2O43679 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
LDB2O43679 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
LDB2O43679 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.64□□□□□ -1.67
LDB2O43679 AC126323.6-202ENST00000568092 3511 ntBASIC4.64□□□□□ -1.67
LDB2O43679 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LDB2O43679 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.64□□□□□ -1.67
LDB2O43679 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LDB2O43679 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
LDB2O43679 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LDB2O43679 KARSP3-201ENST00000571212 1504 ntBASIC4.64□□□□□ -1.67
LDB2O43679 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC4.64□□□□□ -1.67
LDB2O43679 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LDB2O43679 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
LDB2O43679 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LDB2O43679 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LDB2O43679 MIR192-201ENST00000384915 110 ntBASIC4.64□□□□□ -1.67
LDB2O43679 MIR921-201ENST00000401133 56 ntBASIC4.64□□□□□ -1.67
LDB2O43679 MAST4-207ENST00000407621 559 ntTSL 2 BASIC4.64□□□□□ -1.67
LDB2O43679 AL008987.1-201ENST00000415528 237 ntBASIC4.64□□□□□ -1.67
LDB2O43679 AC019050.1-201ENST00000418508 492 ntBASIC4.64□□□□□ -1.67
LDB2O43679 RPF2P1-201ENST00000424137 906 ntBASIC4.64□□□□□ -1.67
LDB2O43679 LINC02238-201ENST00000424953 557 ntTSL 5 BASIC4.64□□□□□ -1.67
LDB2O43679 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC4.64□□□□□ -1.67
LDB2O43679 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC4.64□□□□□ -1.67
LDB2O43679 RPL7P29-201ENST00000437151 728 ntBASIC4.64□□□□□ -1.67
LDB2O43679 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.64□□□□□ -1.67
LDB2O43679 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.64□□□□□ -1.67
LDB2O43679 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.64□□□□□ -1.67
LDB2O43679 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LDB2O43679 USP9YP25-201ENST00000457708 443 ntBASIC4.64□□□□□ -1.67
LDB2O43679 SCARNA10-201ENST00000459255 330 ntBASIC4.64□□□□□ -1.67
LDB2O43679 AC104687.1-201ENST00000485829 412 ntBASIC4.64□□□□□ -1.67
LDB2O43679 RPS4XP18-201ENST00000495480 763 ntBASIC4.64□□□□□ -1.67
LDB2O43679 AC111193.1-201ENST00000504097 155 ntBASIC4.64□□□□□ -1.67
LDB2O43679 AC010486.2-201ENST00000505572 483 ntBASIC4.64□□□□□ -1.67
LDB2O43679 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC4.64□□□□□ -1.67
LDB2O43679 AC104108.1-201ENST00000509930 412 ntBASIC4.64□□□□□ -1.67
LDB2O43679 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.64□□□□□ -1.67
LDB2O43679 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC4.64□□□□□ -1.67
LDB2O43679 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.64□□□□□ -1.67
LDB2O43679 snoZ278.1-201ENST00000517059 112 ntBASIC4.64□□□□□ -1.67
LDB2O43679 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC4.64□□□□□ -1.67
LDB2O43679 OR5M2P-201ENST00000529003 936 ntBASIC4.64□□□□□ -1.67
LDB2O43679 ALOX12P2-208ENST00000574183 519 ntTSL 3 BASIC4.64□□□□□ -1.67
LDB2O43679 MTCO1P40-201ENST00000574371 625 ntBASIC4.64□□□□□ -1.67
LDB2O43679 MIR548Y-201ENST00000582739 110 ntBASIC4.64□□□□□ -1.67
LDB2O43679 AP001269.3-201ENST00000588718 329 ntBASIC4.64□□□□□ -1.67
LDB2O43679 IL21-202ENST00000611104 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LDB2O43679 AC024257.5-201ENST00000612739 531 ntBASIC4.64□□□□□ -1.67
LDB2O43679 AC021106.3-201ENST00000623925 531 ntBASIC4.64□□□□□ -1.67
LDB2O43679 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.64□□□□□ -1.67
LDB2O43679 POPDC3-201ENST00000254765 1345 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LDB2O43679 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
LDB2O43679 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
LDB2O43679 NSRP1P1-201ENST00000444067 1693 ntBASIC4.64□□□□□ -1.67
LDB2O43679 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LDB2O43679 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.63□□□□□ -1.67
LDB2O43679 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
LDB2O43679 IQCH-202ENST00000358767 3062 ntTSL 5 BASIC4.63□□□□□ -1.67
LDB2O43679 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.63□□□□□ -1.67
LDB2O43679 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.63□□□□□ -1.67
LDB2O43679 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
LDB2O43679 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.63□□□□□ -1.67
LDB2O43679 AL136131.1-201ENST00000406079 803 ntBASIC4.63□□□□□ -1.67
LDB2O43679 RPS16P5-201ENST00000406501 404 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AC016397.1-201ENST00000412463 242 ntBASIC4.63□□□□□ -1.67
LDB2O43679 LINC01881-201ENST00000416103 412 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AL590139.1-201ENST00000416267 400 ntBASIC4.63□□□□□ -1.67
LDB2O43679 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.63□□□□□ -1.67
LDB2O43679 AC027644.1-201ENST00000419595 298 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AC245028.1-201ENST00000423259 256 ntBASIC4.63□□□□□ -1.67
LDB2O43679 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.63□□□□□ -1.67
LDB2O43679 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.63□□□□□ -1.67
LDB2O43679 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.63□□□□□ -1.67
LDB2O43679 AL591363.1-201ENST00000450091 483 ntBASIC4.63□□□□□ -1.67
LDB2O43679 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.63□□□□□ -1.67
LDB2O43679 ISCUP1-201ENST00000454451 448 ntBASIC4.63□□□□□ -1.67
LDB2O43679 NDUFA12P1-201ENST00000455914 406 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC4.63□□□□□ -1.67
LDB2O43679 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.63□□□□□ -1.67
LDB2O43679 AC037198.2-201ENST00000478845 733 ntBASIC4.63□□□□□ -1.67
LDB2O43679 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC4.63□□□□□ -1.67
LDB2O43679 RPL23AP72-201ENST00000492447 435 ntBASIC4.63□□□□□ -1.67
LDB2O43679 AC093890.1-201ENST00000502554 540 ntBASIC4.63□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 108.8 ms