Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
SMAD6O43541 SNORD113.2-201ENST00000364166 89 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 RNU6-636P-201ENST00000384598 107 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC4.75□□□□□ -1.65
SMAD6O43541 MIR1271-201ENST00000408537 86 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 RN7SKP267-201ENST00000410381 285 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 RNU6-603P-201ENST00000411403 107 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SMAD6O43541 AL807761.1-201ENST00000417622 171 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AC245028.1-201ENST00000423259 256 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 CKS1BP6-201ENST00000424932 240 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AC010153.1-201ENST00000432862 727 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AC084290.1-201ENST00000434995 374 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC4.75□□□□□ -1.65
SMAD6O43541 AC092013.1-201ENST00000438795 332 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.75□□□□□ -1.65
SMAD6O43541 ELOCP10-201ENST00000440624 327 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 H2AFZP6-201ENST00000444403 394 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC4.75□□□□□ -1.65
SMAD6O43541 GEMIN8P3-201ENST00000445417 720 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC4.75□□□□□ -1.65
SMAD6O43541 RHEBP2-201ENST00000450289 600 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 RPL5P30-201ENST00000465511 891 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 OR52A4P-201ENST00000472867 958 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.75□□□□□ -1.65
SMAD6O43541 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.75□□□□□ -1.65
SMAD6O43541 AC111000.3-201ENST00000508057 576 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SMAD6O43541 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.75□□□□□ -1.65
SMAD6O43541 OR5BM1P-201ENST00000512021 366 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AC138938.1-201ENST00000515431 782 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SMAD6O43541 MTCO2P15-201ENST00000532655 656 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC4.75□□□□□ -1.65
SMAD6O43541 AC027807.1-201ENST00000559921 996 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC4.75□□□□□ -1.65
SMAD6O43541 AC209154.1-201ENST00000582156 337 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.75□□□□□ -1.65
SMAD6O43541 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.75□□□□□ -1.65
SMAD6O43541 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC4.75□□□□□ -1.65
SMAD6O43541 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.75□□□□□ -1.65
SMAD6O43541 MTCO3P22-201ENST00000603219 784 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 ELOCP34-201ENST00000604436 327 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AL583856.2-201ENST00000606298 543 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AC019131.2-201ENST00000609071 870 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC4.75□□□□□ -1.65
SMAD6O43541 LINC00901.1-201ENST00000617252 152 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC4.75□□□□□ -1.65
SMAD6O43541 AC131159.1-201ENST00000621854 213 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SMAD6O43541 CARF-203ENST00000414439 2099 ntTSL 2 BASIC4.75□□□□□ -1.65
SMAD6O43541 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SMAD6O43541 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
SMAD6O43541 LINC01109-201ENST00000603837 3081 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.75□□□□□ -1.65
SMAD6O43541 AC074029.4-201ENST00000624796 1859 ntBASIC4.75□□□□□ -1.65
SMAD6O43541 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC4.75□□□□□ -1.65
SMAD6O43541 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.75□□□□□ -1.65
SMAD6O43541 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
SMAD6O43541 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SMAD6O43541 AL445487.1-201ENST00000415694 1580 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SMAD6O43541 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.74□□□□□ -1.65
SMAD6O43541 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.74□□□□□ -1.65
SMAD6O43541 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.74□□□□□ -1.65
SMAD6O43541 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.74□□□□□ -1.65
SMAD6O43541 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SMAD6O43541 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
SMAD6O43541 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SMAD6O43541 ABCA6-206ENST00000590645 1511 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
SMAD6O43541 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SMAD6O43541 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SMAD6O43541 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SMAD6O43541 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SMAD6O43541 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SMAD6O43541 Y_RNA.201-201ENST00000364052 96 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 RNU4-24P-201ENST00000364565 139 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SMAD6O43541 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
SMAD6O43541 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.74□□□□□ -1.65
SMAD6O43541 SFR1P1-201ENST00000403720 688 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 AL356131.1-201ENST00000405826 414 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
SMAD6O43541 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.74□□□□□ -1.65
SMAD6O43541 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC4.74□□□□□ -1.65
SMAD6O43541 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.74□□□□□ -1.65
SMAD6O43541 LINC00161-201ENST00000412526 870 ntTSL 2 BASIC4.74□□□□□ -1.65
SMAD6O43541 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC4.74□□□□□ -1.65
SMAD6O43541 TATDN1P1-201ENST00000414123 891 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 AL158825.1-201ENST00000414735 521 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.74□□□□□ -1.65
SMAD6O43541 TIMM9P2-201ENST00000419324 266 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 AC006065.1-201ENST00000422539 802 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 OR2AH1P-201ENST00000425717 928 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 DEFB130D-201ENST00000426866 237 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 AL390023.1-201ENST00000428836 262 ntBASIC4.74□□□□□ -1.65
SMAD6O43541 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.74□□□□□ -1.65
SMAD6O43541 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC4.74□□□□□ -1.65
SMAD6O43541 AC005345.1-201ENST00000431868 217 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms