Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 EIF3FP1-201ENST00000613970 806 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AC231759.1-201ENST00000616455 597 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 OR5BE1P-202ENST00000641168 1176 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 HSP90AA4P-202ENST00000506915 2228 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 OMA1-201ENST00000371226 1935 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 MTND4P34-201ENST00000572715 1371 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 AC092447.7-201ENST00000422212 1621 ntBASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
LINC01558Q9Y6Z2 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 MAPK6PS3-201ENST00000403865 2162 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 RNA5SP46-201ENST00000362370 120 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 BPHL-201ENST00000380368 797 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 MIR607-201ENST00000385241 96 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 RAB5CP1-201ENST00000395972 580 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 RN7SKP156-201ENST00000410308 342 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 MFSD13B-201ENST00000420133 1290 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 RPL21P40-201ENST00000428586 483 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC068287.1-201ENST00000430283 295 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 HMGB1P12-201ENST00000438594 598 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC074367.1-201ENST00000438685 1125 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 HMGN1P32-201ENST00000441744 256 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC090954.1-201ENST00000445502 361 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 CEACAMP6-201ENST00000452007 574 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 ACA64.1-201ENST00000459171 127 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 RPL31P13-201ENST00000484151 370 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 EIF1P7-201ENST00000487533 337 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 RN7SL362P-201ENST00000494228 267 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC105233.1-201ENST00000498840 781 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC147055.1-201ENST00000509261 750 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC134698.1-201ENST00000511619 643 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 RNA5SP441-201ENST00000516809 88 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AL161751.1-201ENST00000555636 1044 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC091167.5-201ENST00000605689 894 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC010245.2-201ENST00000606908 1167 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC004839.1-201ENST00000610269 501 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AL512624.1-201ENST00000613638 469 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC145207.9-201ENST00000623802 325 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 5S_rRNA.29-201ENST00000641250 107 ntBASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC1.94□□□□□ -2.1
LINC01558Q9Y6Z2 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 AC093831.2-201ENST00000624393 3427 ntBASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC1.93□□□□□ -2.1
LINC01558Q9Y6Z2 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 106.7 ms