Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AC134882.1-201ENST00000603738 1676 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 SALL4P7-201ENST00000555779 3120 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 CABYR-216ENST00000621648 2226 ntAPPRIS P4 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 ZNF474-201ENST00000296600 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AC010894.1-201ENST00000313760 361 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 RNU4-66P-201ENST00000365199 138 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 RNU6-441P-201ENST00000384545 106 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 Y_RNA.530-201ENST00000384587 101 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 MIR649-201ENST00000384843 97 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AL023807.1-201ENST00000407932 359 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AC096632.1-201ENST00000427395 310 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AL731563.1-201ENST00000442202 214 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 TRAPPC2P3-201ENST00000443200 321 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 RN7SL187P-201ENST00000495587 303 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 SNX18P23-201ENST00000510867 677 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 RNA5SP473-201ENST00000516402 125 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 RNA5SP92-201ENST00000516437 110 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 RN7SKP96-201ENST00000516948 297 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 MIR3154-201ENST00000577829 84 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AL022099.1-201ENST00000604551 712 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AL035410.2-201ENST00000604963 864 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 HSPE1P14-201ENST00000605812 302 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 DACH2-207ENST00000510272 1764 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AC107067.1-201ENST00000500009 1654 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 OR2AH1P-202ENST00000641232 2744 ntBASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 IFT80-225ENST00000496589 3073 ntTSL 2 BASIC6.61□□□□□ -1.35
PCDHB11Q9Y5F2 AP001350.1-201ENST00000601906 1524 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 ACTR3BP5-201ENST00000448440 1479 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 CYP2G2P-201ENST00000594920 1485 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 MROH3P-201ENST00000435735 2676 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 Y_RNA.112-201ENST00000363250 102 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 Y_RNA.193-201ENST00000363979 102 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 Y_RNA.414-201ENST00000384011 101 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 RNU6-505P-201ENST00000384427 107 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 MT-TG-201ENST00000387429 68 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 MIR454-201ENST00000390180 115 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 MIR541-201ENST00000401360 84 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 CYCSP17-201ENST00000407870 315 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 MIR548K-201ENST00000408406 116 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 MIR548F5-201ENST00000408421 86 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 RNA5SP345-201ENST00000410646 108 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC012065.2-201ENST00000421295 375 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 OR4K11P-201ENST00000431829 904 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 RPL37P1-201ENST00000432310 284 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC234771.2-201ENST00000445718 597 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 RPL7AP71-201ENST00000451120 739 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC107399.1-201ENST00000451226 265 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 RNU6-1208P-201ENST00000459588 107 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 RN7SL382P-201ENST00000482631 282 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC024558.1-201ENST00000505008 528 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 Y_RNA.682-201ENST00000516457 100 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 RN7SKP219-201ENST00000516825 296 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 RNU6-1137P-201ENST00000517073 99 ntBASIC6.6□□□□□ -1.35
PCDHB11Q9Y5F2 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 89.7 ms