Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 CNOT7P2-201ENST00000441051 832 ntBASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 RPL23AP43-201ENST00000446445 471 ntBASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 snoU13.20-201ENST00000459180 104 ntBASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 AL035404.1-201ENST00000497982 568 ntBASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 AC090568.1-201ENST00000509499 856 ntBASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 RN7SKP276-201ENST00000516242 268 ntBASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 NTAN1P1-201ENST00000603150 646 ntBASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 AC010680.4-201ENST00000605334 543 ntBASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 AC012603.1-201ENST00000606424 528 ntBASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 MKKS-203ENST00000609375 882 ntTSL 2 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 AP002799.1-201ENST00000623552 423 ntBASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 AC006065.6-201ENST00000625201 545 ntBASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 AC009452.1-201ENST00000640823 606 ntBASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC3.61□□□□□ -1.83
KCNIP3Q9Y2W7 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 RNU4-4P-201ENST00000364588 130 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 SNORD66.1-201ENST00000391230 76 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AMMECR1LP1-201ENST00000415152 841 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 BX510359.2-201ENST00000417920 305 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AC005189.1-201ENST00000431286 310 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AC105402.2-201ENST00000438503 358 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AC073850.1-201ENST00000449243 255 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AC007537.2-201ENST00000472093 511 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 TRBV8-2-201ENST00000475637 270 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 MTND4LP2-201ENST00000502312 285 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AC108145.1-201ENST00000503770 153 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AC008494.2-201ENST00000514544 370 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 SOX5P1-201ENST00000524155 1127 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 OR4C2P-201ENST00000530855 1064 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AC008033.2-201ENST00000542626 177 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AF230666.2-201ENST00000602328 725 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AL392112.1-201ENST00000605115 829 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AC023043.4-201ENST00000612081 449 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AC026124.2-201ENST00000621847 656 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 AL163152.1-201ENST00000642001 374 ntBASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.6□□□□□ -1.83
KCNIP3Q9Y2W7 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 ZNF962P-201ENST00000443465 3140 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 MAPK10-372ENST00000641954 3413 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 ATXN3-248ENST00000558190 26812 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 RPL9-201ENST00000295955 750 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 AC021146.4-201ENST00000309229 279 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 RNA5SP305-201ENST00000362665 119 ntBASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC3.59□□□□□ -1.83
KCNIP3Q9Y2W7 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms