Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 AC073069.1-201ENST00000428657 441 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 PRELID3BP10-201ENST00000431957 584 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AL357520.1-201ENST00000441557 453 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 TPMTP4-201ENST00000450749 678 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 RPL23AP23-201ENST00000452590 471 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 DDX39BP2-208ENST00000453923 258 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC133473.1-201ENST00000455173 299 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC105460.2-202ENST00000502936 825 ntTSL 2 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC139783.2-201ENST00000504847 1145 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AP002812.4-201ENST00000532139 286 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC074050.1-201ENST00000563247 211 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC069366.1-201ENST00000583159 838 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC007423.1-201ENST00000605009 627 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RNF6Q9Y252 U6.48-201ENST00000618523 106 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC007546.2-201ENST00000623996 360 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC024023.1-201ENST00000624530 922 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 ZNF90P1-201ENST00000480493 1951 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
RNF6Q9Y252 PCDH11X-205ENST00000373094 9179 ntAPPRIS P4 TSL 1 (best) BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.1□□□□□ -1.75
RNF6Q9Y252 AC097504.1-201ENST00000515103 2415 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 IQCB2P-201ENST00000401788 1633 ntBASIC4.1□□□□□ -1.75
RNF6Q9Y252 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RNF6Q9Y252 AC009951.1-201ENST00000623674 2614 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 AL133243.3-201ENST00000617415 3004 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNF6Q9Y252 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNF6Q9Y252 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RNF6Q9Y252 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 RNA5SP307-201ENST00000362863 116 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 RPS23P10-201ENST00000416185 486 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 AC073136.2-201ENST00000417282 849 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 RAD23BP1-201ENST00000421404 1227 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 AL353093.1-201ENST00000441292 436 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 MTND2P8-201ENST00000450555 1025 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 TFEC-208ENST00000484212 1245 ntTSL 2 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 PPM1AP1-201ENST00000502740 1135 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 COL6A4P2-205ENST00000509855 506 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 AC025260.1-201ENST00000548858 430 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 POLR2KP1-201ENST00000553226 168 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 AC025918.2-201ENST00000558683 763 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 RPL23AP97-201ENST00000568955 471 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 MIR3160-1-201ENST00000577972 85 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 MIR3138-201ENST00000585238 82 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 AC115085.1-201ENST00000588924 229 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 VN1R84P-201ENST00000593697 235 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 AC010857.1-201ENST00000606398 594 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RNF6Q9Y252 AC009318.3-201ENST00000616916 503 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 RMST_9.1-201ENST00000619945 193 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RNF6Q9Y252 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 MIR4727-201ENST00000622232 55 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 CR392039.4-201ENST00000624968 501 ntBASIC4.09□□□□□ -1.75
RNF6Q9Y252 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC4.09□□□□□ -1.75
RNF6Q9Y252 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
RNF6Q9Y252 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.75
RNF6Q9Y252 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RNF6Q9Y252 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
RNF6Q9Y252 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.09□□□□□ -1.76
RNF6Q9Y252 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.09□□□□□ -1.76
RNF6Q9Y252 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.09□□□□□ -1.76
RNF6Q9Y252 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.09□□□□□ -1.76
RNF6Q9Y252 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
RNF6Q9Y252 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC4.09□□□□□ -1.76
RNF6Q9Y252 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms