Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 OR51A6P-201ENST00000418680 1004 ntBASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 SUN3-208ENST00000453192 801 ntTSL 5 BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 MIR4433B-201ENST00000581329 102 ntBASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 AL157762.1-201ENST00000619612 415 ntBASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.69□□□□□ -1.5
SHANK2Q9UPX8 UBE3AP2-201ENST00000429033 2259 ntBASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 SMG1P4-204ENST00000523028 4131 ntBASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 RNU6ATAC10P-201ENST00000408635 111 ntBASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 CYCSP35-201ENST00000451978 304 ntBASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 RPS4XP10-201ENST00000465034 731 ntBASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 FTH1P9-201ENST00000513251 355 ntBASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 AC078962.4-201ENST00000546135 254 ntTSL 3 BASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 CFL2-206ENST00000556161 546 ntTSL 4 BASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SHANK2Q9UPX8 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHANK2Q9UPX8 MTCO1P46-201ENST00000451639 1491 ntBASIC5.67□□□□□ -1.5
SHANK2Q9UPX8 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SHANK2Q9UPX8 RPL7P60-201ENST00000397636 735 ntBASIC5.67□□□□□ -1.5
SHANK2Q9UPX8 EIF4A1P11-201ENST00000451239 222 ntBASIC5.67□□□□□ -1.5
SHANK2Q9UPX8 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC5.67□□□□□ -1.5
SHANK2Q9UPX8 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC5.67□□□□□ -1.5
SHANK2Q9UPX8 OR7E13P-201ENST00000526052 910 ntBASIC5.67□□□□□ -1.5
SHANK2Q9UPX8 AL354760.1-201ENST00000608357 643 ntBASIC5.67□□□□□ -1.5
SHANK2Q9UPX8 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC5.67□□□□□ -1.5
SHANK2Q9UPX8 AP000553.6-201ENST00000641242 118 ntBASIC5.67□□□□□ -1.5
SHANK2Q9UPX8 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SHANK2Q9UPX8 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 Y_RNA.510-201ENST00000384511 114 ntBASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 MIR490-201ENST00000384865 128 ntBASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 HMGN1P11-201ENST00000508668 303 ntBASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 OR4A12P-201ENST00000530847 918 ntBASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 OR5B10P-201ENST00000532869 642 ntBASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 AC090877.1-201ENST00000561418 344 ntBASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 AL390816.3-201ENST00000604527 1066 ntBASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 AC116312.1-201ENST00000606841 314 ntBASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 AC011816.2-201ENST00000607089 556 ntBASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SHANK2Q9UPX8 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SHANK2Q9UPX8 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.65□□□□□ -1.5
SHANK2Q9UPX8 SETP9-201ENST00000423837 832 ntBASIC5.65□□□□□ -1.5
SHANK2Q9UPX8 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.65□□□□□ -1.5
SHANK2Q9UPX8 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC5.65□□□□□ -1.5
SHANK2Q9UPX8 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC5.65□□□□□ -1.5
SHANK2Q9UPX8 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC5.65□□□□□ -1.5
SHANK2Q9UPX8 AC022695.1-201ENST00000522089 237 ntBASIC5.65□□□□□ -1.5
SHANK2Q9UPX8 AC093524.1-201ENST00000564266 1094 ntBASIC5.65□□□□□ -1.5
SHANK2Q9UPX8 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC5.65□□□□□ -1.5
SHANK2Q9UPX8 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
SHANK2Q9UPX8 AL121839.2-201ENST00000565058 6943 ntBASIC5.65□□□□□ -1.5
SHANK2Q9UPX8 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.65□□□□□ -1.51
SHANK2Q9UPX8 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SHANK2Q9UPX8 DAZ4-206ENST00000449750 3271 ntTSL 5 BASIC5.65□□□□□ -1.51
SHANK2Q9UPX8 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC5.65□□□□□ -1.51
SHANK2Q9UPX8 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 LINC01034-201ENST00000448806 277 ntTSL 3 BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 AC006511.1-201ENST00000470614 315 ntBASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 SETP14-201ENST00000497538 873 ntBASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 LINC01017-201ENST00000508823 768 ntTSL 3 BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 STX3-204ENST00000530221 534 ntTSL 5 BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 AC007458.1-201ENST00000542812 373 ntBASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
SHANK2Q9UPX8 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms