Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 RPL7P28-201ENST00000437739 740 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 GAPDHP37-201ENST00000442317 968 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 RPSAP40-201ENST00000442343 891 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 SNRPBP1-201ENST00000443634 282 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 UBBP5-201ENST00000446970 266 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 AC073610.1-201ENST00000489971 396 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 SUMO2P4-201ENST00000504193 276 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 AC090136.1-201ENST00000520009 240 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 AC107934.1-201ENST00000522215 217 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 RN7SL199P-201ENST00000578752 281 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 RN7SL656P-201ENST00000579044 281 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 RN7SL404P-201ENST00000582421 281 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 Z82243.1-201ENST00000609432 473 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 Six3os1_4.1-201ENST00000615706 324 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 ZNF426-201ENST00000253115 7085 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 DTNA-204ENST00000348997 4518 ntAPPRIS P3 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 OR8B8-202ENST00000642064 3914 ntAPPRIS P1 BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 CASC19-260ENST00000641828 2001 ntBASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
TRIM35Q9UPQ4 ACSL5-203ENST00000356116 3353 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 AC106886.5-201ENST00000380361 11692 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 Y_RNA.367-201ENST00000365544 101 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 RBMY1KP-201ENST00000423480 476 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 AC092106.2-201ENST00000436597 487 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 RPL12P49-201ENST00000441100 121 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 AL034369.1-201ENST00000453808 477 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 RPL7L1P8-201ENST00000469911 741 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 AC104687.1-201ENST00000485829 412 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 SNRPCP11-201ENST00000492453 205 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 AC093664.1-201ENST00000511779 289 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 GAPDHP62-201ENST00000515313 990 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 RNU6-1004P-201ENST00000516584 111 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 Y_RNA.708-201ENST00000516950 96 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 AC068880.2-201ENST00000521016 362 ntTSL 5 BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 RN7SL270P-201ENST00000579643 281 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 AL157899.1-201ENST00000604110 936 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 AC009229.3-201ENST00000608056 282 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 MIR6813-201ENST00000621638 56 ntBASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 PBLD-204ENST00000358769 2587 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 THRB-202ENST00000356447 6345 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 NPHP1-203ENST00000393272 2752 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 KNG1-201ENST00000265023 3435 ntAPPRIS ALT1 TSL 2 BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
TRIM35Q9UPQ4 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 TPTE2P4-201ENST00000258589 1605 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 ZNF561-204ENST00000424629 4419 ntTSL 2 BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AL449283.1-201ENST00000602631 3403 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AL008638.3-201ENST00000623027 5182 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AC011592.1-201ENST00000624647 3634 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 PHACTR2-201ENST00000305766 1851 ntAPPRIS P3 TSL 2 BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AC068870.3-201ENST00000625077 2536 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 Y_RNA.122-201ENST00000363331 96 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 Y_RNA.404-201ENST00000383978 102 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 RNU6-98P-201ENST00000384173 107 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 Y_RNA.539-201ENST00000384635 107 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 RNU6-244P-201ENST00000391028 104 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 OR6C66P-201ENST00000414917 930 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 HNRNPA3P4-201ENST00000427514 803 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 RPS20P5-201ENST00000434808 360 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AL450996.1-201ENST00000445574 1202 ntBASIC8.69□□□□□ -1.02
TRIM35Q9UPQ4 AC243772.1-201ENST00000451620 410 ntBASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms