Protein–RNA interactions for Protein: Q9UDT6

CLIP2, CAP-Gly domain-containing linker protein 2, humanhuman

Predictions only

Length 1,046 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2Q9UDT6 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 RNU11-4P-201ENST00000391149 133 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 AC108032.1-201ENST00000416706 207 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 AL356276.2-201ENST00000435919 558 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 MTCYBP29-201ENST00000436327 1006 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 CACYBPP1-201ENST00000438592 684 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 ELOCP10-201ENST00000440624 327 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 Z99127.2-201ENST00000441426 334 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 AC006326.1-201ENST00000445465 787 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 ABCF2P2-201ENST00000450549 296 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 AC139783.2-201ENST00000504847 1145 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 RNU6-491P-201ENST00000516099 110 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 AC092868.3-201ENST00000560515 784 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 AC018552.3-201ENST00000567416 561 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 MTCO2P22-201ENST00000603246 681 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 ELOCP34-201ENST00000604436 327 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 MIR432-201ENST00000606207 94 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 AC074276.2-201ENST00000619891 348 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 AC145207.9-201ENST00000623802 325 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 AC019080.5-201ENST00000624891 757 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 PNPT1P2-201ENST00000456768 2050 ntBASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 SMG1P1-206ENST00000431681 2913 ntTSL 2 BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
CLIP2Q9UDT6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLIP2Q9UDT6 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.9□□□□□ -1.62
CLIP2Q9UDT6 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.9□□□□□ -1.62
CLIP2Q9UDT6 ZNF962P-201ENST00000443465 3140 ntBASIC4.9□□□□□ -1.62
CLIP2Q9UDT6 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.9□□□□□ -1.62
CLIP2Q9UDT6 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CLIP2Q9UDT6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLIP2Q9UDT6 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.9□□□□□ -1.62
CLIP2Q9UDT6 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLIP2Q9UDT6 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.9□□□□□ -1.62
CLIP2Q9UDT6 RLIMP1-201ENST00000339626 1680 ntBASIC4.9□□□□□ -1.62
CLIP2Q9UDT6 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
CLIP2Q9UDT6 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.9□□□□□ -1.62
CLIP2Q9UDT6 RNU6-1279P-201ENST00000383917 103 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 SNORA37-201ENST00000384504 129 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AL603766.1-201ENST00000407763 664 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AL117339.2-201ENST00000430475 180 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 MTCO1P57-201ENST00000432182 261 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 RPL23AP46-201ENST00000438548 490 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 NDUFS5P3-201ENST00000450668 321 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 RNA5SP246-201ENST00000458909 119 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AL132838.2-201ENST00000492041 314 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AC067904.2-201ENST00000517322 1283 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 MTND2P7-201ENST00000521337 640 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 DEFB109D-201ENST00000529497 240 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AC027176.2-201ENST00000559166 746 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AC068714.1-201ENST00000559623 800 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AC022655.2-201ENST00000577280 318 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AC068790.5-201ENST00000602741 355 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AC005021.1-201ENST00000608730 355 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 OR6R2P-201ENST00000609216 300 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AC119674.1-220ENST00000641502 1048 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 OR11H5P-202ENST00000641612 1325 ntBASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CLIP2Q9UDT6 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
CLIP2Q9UDT6 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.89□□□□□ -1.63
CLIP2Q9UDT6 RNA5SP388-201ENST00000362584 119 ntBASIC4.89□□□□□ -1.63
CLIP2Q9UDT6 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC4.89□□□□□ -1.63
CLIP2Q9UDT6 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLIP2Q9UDT6 ENSAP1-201ENST00000392855 326 ntBASIC4.89□□□□□ -1.63
CLIP2Q9UDT6 CLEC7A-206ENST00000396484 1000 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CLIP2Q9UDT6 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 109.5 ms