Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 MIR4644-201ENST00000579929 84 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AC009303.3-201ENST00000591103 736 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AC007423.1-201ENST00000605009 627 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 Mico1.1-201ENST00000611698 204 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 AC053481.2-202ENST00000582394 1500 ntBASIC3.78□□□□□ -1.8
VAPAQ9P0L0 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
VAPAQ9P0L0 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 NCAPGP1-201ENST00000505112 1814 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AC017002.4-201ENST00000604721 1525 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AC007685.1-201ENST00000329806 452 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 SNORA60-201ENST00000362396 134 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 SNORA58B-201ENST00000364259 136 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 HMGB3P19-201ENST00000403971 560 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 RPS27AP7-201ENST00000422792 455 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AL732292.1-201ENST00000426692 226 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 FTH1P6-201ENST00000430768 320 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 CBX1P1-201ENST00000440184 427 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 FCF1P7-201ENST00000451185 558 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 Z95152.1-201ENST00000453556 656 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AC092691.2-201ENST00000461787 803 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 IGBP1P5-201ENST00000507524 1000 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AC067904.2-201ENST00000517322 1283 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AC022081.1-201ENST00000537327 433 ntTSL 2 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 TOMM20P2-201ENST00000540082 421 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AC009101.1-201ENST00000568135 242 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AC010680.3-201ENST00000604215 520 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
VAPAQ9P0L0 AC139713.2-214ENST00000642059 1811 ntBASIC3.77□□□□□ -1.81
VAPAQ9P0L0 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 ATXN3-207ENST00000503767 1315 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 RNA5SP366-201ENST00000365454 123 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 HMGN2P8-201ENST00000391458 268 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 ST13P16-201ENST00000401760 781 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AL133270.1-201ENST00000402635 279 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AL035696.2-201ENST00000407941 709 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AL139128.1-201ENST00000413921 941 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 RBMY2KP-201ENST00000418221 992 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AC083863.1-201ENST00000438811 231 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 ACTR3P2-201ENST00000439585 1257 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 HMGB1P37-201ENST00000439613 609 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 TXNP2-201ENST00000443918 295 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 VN1R48P-201ENST00000448149 1036 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 RN7SL93P-201ENST00000463035 293 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AC011276.1-201ENST00000469688 323 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AC010683.1-201ENST00000473673 378 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AP000926.1-201ENST00000479573 241 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 RN7SL604P-201ENST00000492589 296 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AC068305.1-201ENST00000497406 726 ntBASIC3.76□□□□□ -1.81
VAPAQ9P0L0 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.76□□□□□ -1.81
VAPAQ9P0L0 NARSP2-201ENST00000518524 679 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms