Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 AL049794.2-201ENST00000616301 365 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC068620.4-201ENST00000636730 1182 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 BX005019.1-201ENST00000561881 1810 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 SUCLA2P2-201ENST00000417269 1309 ntBASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
NCKIPSDQ9NZQ3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 RNU6-398P-201ENST00000384143 109 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 RN7SKP100-201ENST00000411258 284 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 TAF13P2-201ENST00000416876 286 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 RPS24P7-201ENST00000416921 246 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 CYCSP10-201ENST00000417973 294 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AF186996.5-201ENST00000418098 904 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AC019050.1-201ENST00000418508 492 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AL365338.1-201ENST00000422282 858 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 EIF4HP2-201ENST00000424380 563 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AC002542.1-201ENST00000440683 193 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AC005002.1-201ENST00000447458 540 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 PTGES3P5-201ENST00000455109 434 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AC004263.1-201ENST00000479327 332 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 RPL21P131-201ENST00000497298 483 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 PRELID3BP4-201ENST00000515476 571 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AC104417.1-201ENST00000523974 751 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AL121890.2-201ENST00000617644 465 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AP000346.3-201ENST00000622821 210 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 BX649567.1-201ENST00000642071 1134 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 ECM1P2-201ENST00000503354 1577 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AC139713.2-215ENST00000641428 5037 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 AC005332.5-201ENST00000591222 2919 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 DHX9P1-201ENST00000436565 3076 ntBASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.86□□□□□ -1.63
NCKIPSDQ9NZQ3 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 SALL4P2-201ENST00000423288 2910 ntBASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 AC008549.2-201ENST00000333482 706 ntBASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 UBE2Q2P1-202ENST00000354771 883 ntBASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 SNORD116-2-201ENST00000384274 95 ntBASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 SNORD116-6-201ENST00000384711 96 ntBASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 MIR92A2-201ENST00000385299 75 ntBASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 BX510359.2-201ENST00000417920 305 ntBASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 AC010099.3-201ENST00000423896 409 ntBASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 MTND5P25-201ENST00000430499 799 ntBASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 AL359265.2-201ENST00000434367 631 ntBASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 AL050341.1-201ENST00000447743 313 ntBASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 DNAJC19P8-201ENST00000452887 259 ntBASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 RPS6P2-201ENST00000454208 705 ntBASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 AL445433.1-201ENST00000457507 257 ntBASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC4.85□□□□□ -1.63
NCKIPSDQ9NZQ3 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms