Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC011155.1-201ENST00000316512 456 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 RN7SKP227-201ENST00000364445 330 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 COX6CP13-201ENST00000428703 226 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 MTND1P33-201ENST00000446251 917 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AL606517.1-201ENST00000446914 387 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC244505.3-201ENST00000454598 187 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 RPL12P20-201ENST00000475538 479 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC008494.2-201ENST00000514544 370 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 NAV2-AS3-201ENST00000534036 598 ntTSL 3 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC005868.1-201ENST00000536421 331 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 MTND1P8-201ENST00000571424 950 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 MIR4715-201ENST00000584117 79 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC110743.1-201ENST00000584870 478 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 PCNAP1-202ENST00000595299 752 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 RPP40P2-201ENST00000603596 712 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC098935.2-201ENST00000604222 466 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AL022238.2-202ENST00000607915 658 ntTSL 5 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AL445423.1-201ENST00000609941 536 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC234782.5-201ENST00000617723 324 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 MIR6853-201ENST00000619642 74 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 CR381572.2-201ENST00000624852 397 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC025263.3-201ENST00000622965 1396 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 AC092435.4-201ENST00000623012 4159 ntBASIC4.72□□□□□ -1.65
POLR1BQ9H9Y6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.65
POLR1BQ9H9Y6 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.71□□□□□ -1.65
POLR1BQ9H9Y6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.71□□□□□ -1.65
POLR1BQ9H9Y6 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.65
POLR1BQ9H9Y6 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.71□□□□□ -1.65
POLR1BQ9H9Y6 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 RNU6-146P-201ENST00000384602 108 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 MTCO1P56-201ENST00000401674 224 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 RN7SKP106-201ENST00000410832 272 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 RPL12P34-201ENST00000424532 479 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AL158073.1-201ENST00000426848 1104 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 RSL24D1P6-201ENST00000426934 401 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AC114973.1-201ENST00000429057 632 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 TMX2P1-201ENST00000436507 708 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 UBE2V1P5-201ENST00000440070 405 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 RPS29P9-201ENST00000440360 171 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 RRM2P4-201ENST00000441721 562 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 EEF1A1P1-201ENST00000447052 739 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 MRPL35P4-201ENST00000453682 566 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 APOOP2-201ENST00000461561 539 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AC007537.2-201ENST00000472093 511 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AC079203.1-201ENST00000487972 404 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AC005412.2-201ENST00000492004 341 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 CYCSP40-201ENST00000575927 294 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AC002487.1-201ENST00000604565 994 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AL590392.1-201ENST00000604960 446 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AC024060.1-201ENST00000607052 494 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AC092653.1-201ENST00000608509 531 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AC027449.1-201ENST00000608890 407 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AC009318.3-201ENST00000616916 503 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AC090971.4-201ENST00000560291 1800 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 AC015813.6-201ENST00000624409 5808 ntBASIC4.71□□□□□ -1.66
POLR1BQ9H9Y6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 124.7 ms